Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0745250-00 | Rice | nucleus | 60.92 | 85.03 |
| TraesCS6A01G307200.1 | Wheat | nucleus | 98.08 | 65.81 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 97.7 | 65.55 |
| TraesCS6D01G286300.1 | Wheat | nucleus | 97.7 | 65.38 |
| EES07261 | Sorghum | nucleus | 89.66 | 60.31 |
| Zm00001d018038_P001 | Maize | nucleus | 87.74 | 46.45 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 21.84 | 44.88 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 60.54 | 43.65 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 60.54 | 43.65 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 30.65 | 43.48 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 64.37 | 43.41 |
| CDY65270 | Canola | nucleus | 62.07 | 41.01 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 32.18 | 40.78 |
| Bra016294.1-P | Field mustard | nucleus | 62.84 | 39.81 |
| CDY46433 | Canola | nucleus | 62.45 | 39.56 |
| AT1G26870.1 | Thale cress | nucleus | 62.07 | 38.76 |
| Bra024677.1-P | Field mustard | nucleus | 60.15 | 37.74 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 31.42 | 36.12 |
| CDY01755 | Canola | nucleus | 54.79 | 36.02 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 39.85 | 35.99 |
| Bra004403.1-P | Field mustard | nucleus | 54.79 | 35.31 |
| CDX95910 | Canola | nucleus | 54.79 | 34.96 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 43.68 | 33.83 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 42.53 | 32.08 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 30.65 | 28.57 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 31.03 | 27.65 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 32.95 | 26.06 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 35.25 | 25.92 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 33.33 | 24.93 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 33.33 | 24.44 |
| HORVU1Hr1G064300.1 | Barley | nucleus | 36.02 | 23.92 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 30.27 | 23.8 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 34.87 | 23.27 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 32.95 | 23.24 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 36.4 | 23.17 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 33.72 | 23.16 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 35.25 | 22.72 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 33.33 | 22.6 |
| HORVU6Hr1G019380.2 | Barley | plastid | 34.87 | 22.2 |
| HORVU5Hr1G045650.7 | Barley | plastid | 32.95 | 21.03 |
| HORVU0Hr1G026330.2 | Barley | nucleus | 25.29 | 15.87 |
| HORVU2Hr1G017460.4 | Barley | nucleus | 25.29 | 15.71 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287UR94 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU6Hr1G075830 | EnsemblPlants:HORVU6Hr1G075830.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44574 | PANTHER:PTHR44574:SF1 | SUPFAM:SSF101941 | UniParc:UPI000B47251B |
Description
No Description!
Coordinates
chrchr6H:+:522149685..522151935
Molecular Weight (calculated)
29854.6 Da
IEP (calculated)
10.034
GRAVY (calculated)
-0.668
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIRSDDME KQDEVMLPGF RFHPTDEELV RFYLKRKIQQ KSLPIELIRQ LDIYKFDPWD LPKLASTGEK EWYFYCPRDR KYRNSTRPNR VTGAGFWKAT
101: GTDRPIYSSD GSKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLTDPS LPQKKPLEKT IPPNDSWAIC RIFKKTNATA QRALSHSWVS PPLPGTNGTY
201: IPPHLQTTHR SRHTSENTSS AMTNIISSNI QFTGSGYFPS IVSSCQSTLN IIDSISRPAT S
101: GTDRPIYSSD GSKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLTDPS LPQKKPLEKT IPPNDSWAIC RIFKKTNATA QRALSHSWVS PPLPGTNGTY
201: IPPHLQTTHR SRHTSENTSS AMTNIISSNI QFTGSGYFPS IVSSCQSTLN IIDSISRPAT S
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.