Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G026330.2 | Barley | nucleus | 99.05 | 100.0 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 15.95 | 52.76 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 19.76 | 45.11 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 21.19 | 44.5 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 20.0 | 40.78 |
| Bra003998.1-P | Field mustard | nucleus | 21.43 | 37.66 |
| KRH50570 | Soybean | nucleus | 20.48 | 36.91 |
| Bra004385.1-P | Field mustard | cytosol | 23.33 | 36.3 |
| CDY40930 | Canola | cytosol | 23.33 | 36.3 |
| CDX95931 | Canola | cytosol | 23.33 | 36.3 |
| CDY07348 | Canola | nucleus | 23.33 | 36.16 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 19.52 | 36.12 |
| CDY51500 | Canola | nucleus | 23.33 | 36.03 |
| GSMUA_Achr10P... | Banana | nucleus | 25.71 | 35.76 |
| AT1G69490.1 | Thale cress | nucleus | 22.62 | 35.45 |
| VIT_01s0026g02710.t01 | Wine grape | nucleus | 22.86 | 34.04 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 26.9 | 33.83 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 28.1 | 33.81 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 23.1 | 33.11 |
| KRH70773 | Soybean | cytosol | 21.9 | 32.97 |
| KRH74907 | Soybean | nucleus | 21.9 | 32.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.48 | 32.72 |
| PGSC0003DMT400007341 | Potato | mitochondrion | 21.43 | 31.8 |
| Solyc05g007770.2.1 | Tomato | nucleus | 21.19 | 31.56 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 26.67 | 31.55 |
| KRG89575 | Soybean | nucleus | 20.95 | 31.43 |
| Solyc04g005610.2.1 | Tomato | nucleus | 20.48 | 31.27 |
| PGSC0003DMT400047440 | Potato | nucleus | 20.95 | 31.21 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 24.29 | 30.91 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 20.48 | 30.71 |
| Zm00001d022424_P001 | Maize | nucleus | 23.57 | 30.0 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 24.29 | 29.57 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 25.71 | 29.35 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 23.1 | 29.22 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 26.67 | 29.09 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 15.71 | 25.29 |
| HORVU5Hr1G045650.7 | Barley | plastid | 24.05 | 24.69 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 23.33 | 24.69 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 23.57 | 24.44 |
| HORVU6Hr1G019380.2 | Barley | plastid | 23.57 | 24.15 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 18.57 | 23.15 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 15.24 | 22.15 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 17.86 | 21.68 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 17.38 | 20.17 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 17.38 | 20.17 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 18.57 | 20.16 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 16.9 | 19.94 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 16.67 | 18.92 |
| HORVU1Hr1G064300.1 | Barley | nucleus | 17.62 | 18.83 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 16.67 | 18.42 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 17.62 | 18.05 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 16.19 | 17.39 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287H7D9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU2Hr1G017460 | EnsemblPlants:HORVU2Hr1G017460.4 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 | SUPFAM:SSF101941 | UniParc:UPI000B4758F2 | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:-:42269983..42271885
Molecular Weight (calculated)
46998.3 Da
IEP (calculated)
10.809
GRAVY (calculated)
-0.803
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: RTNRPARRDL LPLPVHGAAA STPREQRQPQ GPATGDISTR HPVHPLDPRD RFWFALLIVC AVRGSVGWVV DRSFRWRSRG RGRRRRCRRG SGSTRRTRSS
101: SCTTSATAPP TRRARSHHRQ RRHLQVRPIG PPLPGGDCRW YFFSPRDHKY RNGMRPNRAA SSGYWKATGT DKPIHDAATS QGVGVKKALV FYKGRPPKGT
201: KTAWIMQEYR LAADPLAAAV NTYKPIKFRN VSMRLDDWVL CRIYNKTGLG SPMVPLLADY DHMADHDDLF GGSDFDDATC RPMIKSQQQQ HQQQHQQPHD
301: GRFPTFPSMS ELFDDYAFVQ MFNTDVEHGV HPSRNQLLPV GDSRHVVEPS YYAPSSSPDA SGGSAGKRKA GSPEESATHQ PSAKKLNGSC FDAPSQSAND
401: WQAVASVLGG LNHYSMLPQF
101: SCTTSATAPP TRRARSHHRQ RRHLQVRPIG PPLPGGDCRW YFFSPRDHKY RNGMRPNRAA SSGYWKATGT DKPIHDAATS QGVGVKKALV FYKGRPPKGT
201: KTAWIMQEYR LAADPLAAAV NTYKPIKFRN VSMRLDDWVL CRIYNKTGLG SPMVPLLADY DHMADHDDLF GGSDFDDATC RPMIKSQQQQ HQQQHQQPHD
301: GRFPTFPSMS ELFDDYAFVQ MFNTDVEHGV HPSRNQLLPV GDSRHVVEPS YYAPSSSPDA SGGSAGKRKA GSPEESATHQ PSAKKLNGSC FDAPSQSAND
401: WQAVASVLGG LNHYSMLPQF
001: MEVTSQSTLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD PWQLPEKTEF GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF
Arabidopsis Description
NAC029NAP [Source:UniProtKB/TrEMBL;Acc:A0A178W8K0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.