Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G214100.1 | Wheat | nucleus | 85.61 | 87.97 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 87.56 | 87.35 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 85.61 | 86.24 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 84.63 | 85.68 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 84.63 | 85.47 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 86.1 | 84.86 |
| CDX82430 | Canola | nucleus | 33.66 | 69.35 |
| CDY22671 | Canola | nucleus | 33.17 | 68.34 |
| Os07t0566500-01 | Rice | nucleus | 69.27 | 66.82 |
| OQU90111 | Sorghum | nucleus | 66.1 | 64.83 |
| Zm00001d021818_P002 | Maize | nucleus | 64.39 | 63.01 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 18.29 | 59.06 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 24.63 | 54.89 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 27.07 | 53.88 |
| VIT_00s0375g00040.t01 | Wine grape | nucleus | 42.68 | 52.87 |
| Bra027101.1-P | Field mustard | nucleus | 39.76 | 51.1 |
| CDY12886 | Canola | nucleus | 40.0 | 51.09 |
| AT1G61110.1 | Thale cress | nucleus | 40.0 | 50.77 |
| CDY40970 | Canola | nucleus | 39.76 | 50.62 |
| Solyc07g063420.2.1 | Tomato | nucleus | 39.27 | 48.94 |
| CDY56427 | Canola | nucleus | 38.78 | 48.62 |
| PGSC0003DMT400049664 | Potato | nucleus | 40.0 | 48.38 |
| KRH22138 | Soybean | nucleus | 44.15 | 48.27 |
| KRH27199 | Soybean | nucleus | 43.9 | 48.0 |
| CDX97675 | Canola | nucleus | 40.0 | 47.81 |
| AT1G52880.1 | Thale cress | nucleus | 37.07 | 47.5 |
| CDY69545 | Canola | nucleus | 36.1 | 47.44 |
| Bra027237.1-P | Field mustard | nucleus | 40.49 | 47.29 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 25.85 | 46.7 |
| CDY53806 | Canola | nucleus | 36.1 | 46.54 |
| AT3G15510.1 | Thale cress | nucleus | 40.98 | 46.15 |
| CDY20131 | Canola | nucleus | 39.27 | 46.0 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 36.34 | 45.71 |
| CDX98562 | Canola | nucleus | 40.0 | 45.68 |
| PGSC0003DMT400064428 | Potato | nucleus | 38.78 | 45.3 |
| Bra018997.1-P | Field mustard | nucleus | 36.1 | 45.26 |
| Bra021114.1-P | Field mustard | nucleus | 39.51 | 45.25 |
| Bra001597.1-P | Field mustard | nucleus | 38.05 | 44.57 |
| Solyc10g006880.2.1 | Tomato | nucleus | 37.8 | 43.66 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 37.32 | 42.62 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 27.56 | 40.36 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 28.05 | 39.25 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 33.17 | 38.31 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 31.95 | 37.54 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 28.78 | 35.76 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 22.2 | 34.87 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 28.05 | 34.64 |
| HORVU5Hr1G045650.7 | Barley | plastid | 33.17 | 33.25 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 30.98 | 32.99 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 20.24 | 28.72 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 22.2 | 27.0 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 21.46 | 25.43 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 22.44 | 25.41 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 22.44 | 25.41 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 23.17 | 24.55 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 20.73 | 23.88 |
| HORVU0Hr1G026330.2 | Barley | nucleus | 24.15 | 23.8 |
| HORVU2Hr1G017460.4 | Barley | nucleus | 24.15 | 23.57 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 21.22 | 23.51 |
| HORVU1Hr1G064300.1 | Barley | nucleus | 22.2 | 23.16 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 21.95 | 23.02 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 20.98 | 22.63 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 22.2 | 22.2 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287THX0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU6Hr1G019380 | EnsemblPlants:HORVU6Hr1G019380.2 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 | PANTHER:PTHR45430:SF1 | SUPFAM:SSF101941 | UniParc:UPI000B46D577 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:52562967..52565477
Molecular Weight (calculated)
43938.4 Da
IEP (calculated)
8.717
GRAVY (calculated)
-0.491
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSMGSPDSS SGSAQKPPRH QHQHQPPPPR RQGSAPELPP GFRFHPTDEE LVVHYLKKKA AKAPLPVTII AEVDLYKFDP WELPAEKATF GEHEWYFFSP
101: RDRKYANGAR PNRAATSGYW KATGTDKPIL ASATGCGREK VGVKKALVFY RGKPPRGLKT NWIMHEYRLT GASAGSTTTS RPPPVTGGSR APASLRLDDW
201: VLCRIYKKTS KAAAAVGDEQ RSMECEDSVE DAVTAYPPYA TAGMAGAGAH GSNYVQLLHH HDSHEDNFQL DGLLTEHDVG LSAGAASLGH LAAAARATKQ
301: FLAPSSSTPF NWLEASTGGS ILPQARNFPG FNRSRNVGSM SLSSTADDMA GAVDVSDGGN AVNAMYLPVQ DGTYHQHVIL GAPLAPEAIA GAATSGFQHH
401: VQISGVNWNP
101: RDRKYANGAR PNRAATSGYW KATGTDKPIL ASATGCGREK VGVKKALVFY RGKPPRGLKT NWIMHEYRLT GASAGSTTTS RPPPVTGGSR APASLRLDDW
201: VLCRIYKKTS KAAAAVGDEQ RSMECEDSVE DAVTAYPPYA TAGMAGAGAH GSNYVQLLHH HDSHEDNFQL DGLLTEHDVG LSAGAASLGH LAAAARATKQ
301: FLAPSSSTPF NWLEASTGGS ILPQARNFPG FNRSRNVGSM SLSSTADDMA GAVDVSDGGN AVNAMYLPVQ DGTYHQHVIL GAPLAPEAIA GAATSGFQHH
401: VQISGVNWNP
001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
Arabidopsis Description
NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.