Factsheet for Bra027237.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97675	Canola	nucleus	97.72	100.0
CDX98562	Canola	nucleus	94.02	91.92
AT3G15510.1	Thale cress	nucleus	91.74	88.46
Bra001597.1-P	Field mustard	nucleus	84.9	85.14
Bra021114.1-P	Field mustard	nucleus	85.19	83.52
Bra018997.1-P	Field mustard	nucleus	60.4	64.83
VIT_19s0014g03300.t01	Wine grape	nucleus	59.83	59.49
KRH22138	Soybean	nucleus	59.83	56.0
KRH27199	Soybean	nucleus	58.4	54.67
PGSC0003DMT400064428	Potato	nucleus	52.99	52.99
Solyc10g006880.2.1	Tomato	nucleus	51.57	50.99
Bra027101.1-P	Field mustard	nucleus	45.87	50.47
GSMUA_Achr9P19520_001	Banana	nucleus	46.44	50.0
Bra038663.1-P	Field mustard	nucleus	32.76	46.0
Bra033239.1-P	Field mustard	nucleus	36.47	44.91
GSMUA_Achr1P08860_001	Banana	nucleus	45.87	44.85
Bra004385.1-P	Field mustard	cytosol	34.47	44.81
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	32.48	43.85
Bra029201.1-P	Field mustard	cytosol	33.05	43.77
Bra028645.1-P	Field mustard	nucleus	34.19	43.17
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	34.19	42.86
TraesCS2D01G214100.1	Wheat	nucleus	48.72	42.86
Bra009370.1-P	Field mustard	nucleus	33.9	42.81
HORVU2Hr1G039640.2	Barley	nucleus	49.0	42.47
TraesCS2A01G201800.2	Wheat	nucleus	49.0	42.26
TraesCS2B01G228900.1	Wheat	nucleus	48.43	41.87
Bra003998.1-P	Field mustard	nucleus	28.21	41.42
OQU90111	Sorghum	nucleus	49.0	41.15
TraesCS6D01G096300.1	Wheat	nucleus	48.15	41.12
TraesCS6A01G108300.2	Wheat	nucleus	48.43	40.87
Zm00001d021818_P002	Maize	nucleus	48.72	40.81
Bra001596.1-P	Field mustard	nucleus	34.19	40.68
HORVU6Hr1G019380.2	Barley	plastid	47.29	40.49
Os07t0566500-01	Rice	nucleus	49.0	40.47
Bra026353.1-P	Field mustard	nucleus	33.33	39.0
Bra031949.1-P	Field mustard	nucleus	35.9	38.77
Bra019052.1-P	Field mustard	nucleus	32.76	38.33
Bra040152.1-P	Field mustard	nucleus	38.18	37.53
Bra021113.1-P	Field mustard	nucleus	33.33	36.91
Bra027238.1-P	Field mustard	nucleus	33.9	35.74
Bra000282.1-P	Field mustard	nucleus	24.5	31.62
Bra018998.1-P	Field mustard	nucleus	34.47	31.59
Bra004736.1-P	Field mustard	nucleus	25.07	31.43
Bra037743.1-P	Field mustard	nucleus	24.79	31.41
Bra037283.1-P	Field mustard	nucleus	23.08	29.03
Bra013034.1-P	Field mustard	nucleus	22.79	28.47
Bra039353.1-P	Field mustard	nucleus	24.22	27.69
Bra028441.1-P	Field mustard	nucleus	26.21	27.46
Bra034719.1-P	Field mustard	nucleus	24.22	25.99
Bra002018.1-P	Field mustard	cytosol	22.51	24.76
Bra016294.1-P	Field mustard	nucleus	27.64	23.54
Bra026595.1-P	Field mustard	nucleus	25.93	23.1
Bra017416.1-P	Field mustard	nucleus	25.64	22.61
Bra024677.1-P	Field mustard	nucleus	26.5	22.36
Bra024818.1-P	Field mustard	nucleus	25.36	21.87
Bra004403.1-P	Field mustard	nucleus	25.07	21.73

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra027237	EnsemblPlants:Bra027237.1	EnsemblPlants:Bra027237.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EEM5	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45430	PANTHER:PTHR45430:SF1	SUPFAM:SSF101941
UniParc:UPI0002547A20	SEG:seg	:	:	:	:

Description

AT3G15510 (E=5e-168) ATNAC2, ANAC056, NARS1 | ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2); transcription factor

Coordinates

chrA05:-:19867373..19868793

Molecular Weight (calculated)

38611.5 Da

IEP (calculated)

7.629

GRAVY (calculated)

-0.630

Length

351 amino acids

Sequence
(BLAST)

001: MESTDSSGGP PPPPQPNLPP GFRFHPTDEE LVVHYLKRKA ASAPLPVAII AEVDLYKFDP WELPAKASFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK
101: ATGTDKPVLA SDGNQKVGVK KALVFYSGKP PKGIKSDWIM HEYRLIDNKP NNRPPGCDFG NKKNSLRLDD WVLCRIYKKN NAGRHVDNDK DHDMIDYIFR
201: KIPPSLSMTA ATTGLHHNVS RSMNFFPGGY GIFPDGDPGL YNGSGMINNN IAVCTNGDVV GNGLNHASSS GPMMMANLKR ALPVPFWPVA EEEQDVSPNK
301: RFHGGEGGGD CSNMSSSMME ETPPLMQQQG GVLGDGLTTS YQLTGLNWYS S

Best Arabidopsis Sequence Match ( AT3G15510.1 )
(BLAST)

001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS

Arabidopsis Description

NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.