Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G261800.1 | Wheat | nucleus | 94.91 | 95.15 |
| TraesCS1B01G272600.1 | Wheat | nucleus | 93.64 | 95.09 |
| TraesCS1D01G261800.1 | Wheat | nucleus | 93.89 | 94.86 |
| EES19541 | Sorghum | nucleus | 62.34 | 58.47 |
| Zm00001d010239_P001 | Maize | nucleus | 61.58 | 58.17 |
| Zm00001d038207_P001 | Maize | nucleus | 61.58 | 57.62 |
| Os05t0418800-00 | Rice | plastid | 69.97 | 56.58 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 39.19 | 54.61 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 56.74 | 54.39 |
| GSMUA_Achr10P... | Banana | nucleus | 43.77 | 52.6 |
| GSMUA_Achr10P... | Banana | nucleus | 45.04 | 52.21 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 45.8 | 51.72 |
| GSMUA_Achr11P... | Banana | nucleus | 44.02 | 51.64 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 46.31 | 51.12 |
| GSMUA_Achr11P... | Banana | nucleus | 40.2 | 49.69 |
| PGSC0003DMT400047021 | Potato | nucleus | 45.29 | 44.06 |
| Solyc01g102740.2.1 | Tomato | nucleus | 45.29 | 43.1 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 13.74 | 42.52 |
| Bra026595.1-P | Field mustard | nucleus | 42.24 | 42.13 |
| Bra017416.1-P | Field mustard | nucleus | 42.24 | 41.71 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 41.48 | 41.69 |
| KRH01889 | Soybean | nucleus | 42.75 | 41.69 |
| KRH51263 | Soybean | nucleus | 42.24 | 41.5 |
| Bra024818.1-P | Field mustard | nucleus | 42.75 | 41.28 |
| CDY17437 | Canola | nucleus | 42.49 | 41.13 |
| AT2G02450.2 | Thale cress | nucleus | 43.26 | 41.06 |
| CDY09368 | Canola | nucleus | 42.24 | 40.89 |
| CDY15835 | Canola | nucleus | 42.24 | 40.79 |
| CDY04129 | Canola | nucleus | 42.24 | 40.69 |
| CDY03050 | Canola | nucleus | 42.49 | 40.34 |
| CDY17595 | Canola | nucleus | 42.75 | 40.29 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 18.58 | 39.67 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 20.36 | 38.84 |
| VIT_12s0035g02020.t01 | Wine grape | nucleus | 44.27 | 38.16 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 23.92 | 36.02 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 19.34 | 33.48 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 21.88 | 29.76 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 22.14 | 29.69 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 24.17 | 28.19 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 24.43 | 27.75 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 23.16 | 27.58 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 24.94 | 27.53 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 19.59 | 27.5 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 25.95 | 26.84 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 22.65 | 26.81 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 25.19 | 26.76 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 23.92 | 25.97 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 23.92 | 25.97 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 24.68 | 25.06 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 21.63 | 23.94 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 23.92 | 23.21 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 20.61 | 23.21 |
| HORVU6Hr1G019380.2 | Barley | plastid | 23.16 | 22.2 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 21.63 | 22.08 |
| HORVU5Hr1G045650.7 | Barley | plastid | 22.14 | 21.27 |
| HORVU0Hr1G026330.2 | Barley | nucleus | 18.83 | 17.79 |
| HORVU2Hr1G017460.4 | Barley | nucleus | 18.83 | 17.62 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287FYX0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU1Hr1G064300 | EnsemblPlants:HORVU1Hr1G064300.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45123 | PANTHER:PTHR45123:SF2 | SUPFAM:SSF101941 | UniParc:UPI000B472D69 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:460018528..460021185
Molecular Weight (calculated)
42472.8 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.506
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRDIDEGSV SAATAGGGGG EVGGEPAAGV GDEAAVDSHE NDLVMPGFRF HPTEEELIEF YLRRKVEGRR FNVELITFLD LYRFDPWELP VAMAVIGEKE
101: WFFYVPRDRK YRNGDRPNRV TASGYWKATG ADRMIRGENS RPIGLKKTLV FYSGKAPKGV RSSWIMNEYR LPPPTTDADL FYKSEISLCR VYKRSGIDDG
201: HGRPSSSNVQ AASARPGTSR IIIPPAGQQV SSPSATPLSP TQQPSFHGLV GQGECSSAPL PAIMDQGTQH NNAPQLHQPP PPPPPRPSAY ASAMSSTMSV
301: APAERACTYS LMALADAPMM GSSSTAGDEL SRLVGHSQAY PNHPAVGSHF LPSPSSSQIP PLGEMPVSPA DKLWDWIHPD TTGSRDYGSS SFK
101: WFFYVPRDRK YRNGDRPNRV TASGYWKATG ADRMIRGENS RPIGLKKTLV FYSGKAPKGV RSSWIMNEYR LPPPTTDADL FYKSEISLCR VYKRSGIDDG
201: HGRPSSSNVQ AASARPGTSR IIIPPAGQQV SSPSATPLSP TQQPSFHGLV GQGECSSAPL PAIMDQGTQH NNAPQLHQPP PPPPPRPSAY ASAMSSTMSV
301: APAERACTYS LMALADAPMM GSSSTAGDEL SRLVGHSQAY PNHPAVGSHF LPSPSSSQIP PLGEMPVSPA DKLWDWIHPD TTGSRDYGSS SFK
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.