Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g087920.2.1 | Tomato | nucleus | 89.9 | 92.95 |
| VIT_14s0108g00860.t01 | Wine grape | nucleus | 57.58 | 64.59 |
| KRG93526 | Soybean | nucleus | 52.78 | 56.95 |
| KRH18479 | Soybean | nucleus | 51.77 | 53.95 |
| PGSC0003DMT400080307 | Potato | nucleus | 51.26 | 52.45 |
| TraesCS5D01G239600.1 | Wheat | nucleus | 49.24 | 49.49 |
| TraesCS5A01G228000.1 | Wheat | nucleus | 48.74 | 48.98 |
| TraesCS5B01G226800.1 | Wheat | nucleus | 48.48 | 48.73 |
| CDY11662 | Canola | nucleus | 40.15 | 47.46 |
| Bra028441.1-P | Field mustard | nucleus | 39.39 | 46.57 |
| CDX67438 | Canola | nucleus | 39.14 | 46.27 |
| AT5G39820.1 | Thale cress | nucleus | 38.89 | 45.7 |
| PGSC0003DMT400090327 | Potato | cytosol | 29.04 | 40.49 |
| PGSC0003DMT400054407 | Potato | nucleus | 31.06 | 39.17 |
| PGSC0003DMT400003082 | Potato | nucleus | 27.78 | 39.01 |
| PGSC0003DMT400022365 | Potato | cytosol | 22.98 | 37.14 |
| PGSC0003DMT400007341 | Potato | mitochondrion | 24.49 | 34.28 |
| PGSC0003DMT400049124 | Potato | nucleus | 20.96 | 33.2 |
| PGSC0003DMT400028190 | Potato | nucleus | 23.74 | 32.53 |
| PGSC0003DMT400023917 | Potato | nucleus | 23.74 | 32.3 |
| PGSC0003DMT400047440 | Potato | nucleus | 22.98 | 32.27 |
| PGSC0003DMT400045294 | Potato | nucleus | 23.48 | 31.42 |
| PGSC0003DMT400049664 | Potato | nucleus | 24.75 | 28.91 |
| PGSC0003DMT400082472 | Potato | nucleus | 21.97 | 28.71 |
| PGSC0003DMT400093822 | Potato | nucleus | 20.45 | 27.27 |
| PGSC0003DMT400039670 | Potato | nucleus | 23.99 | 27.07 |
| PGSC0003DMT400049665 | Potato | nucleus | 23.74 | 26.4 |
| PGSC0003DMT400047021 | Potato | nucleus | 26.77 | 26.24 |
| PGSC0003DMT400064428 | Potato | nucleus | 22.73 | 25.64 |
| PGSC0003DMT400048237 | Potato | nucleus | 21.46 | 17.38 |
Protein Annotations
| EntrezGene:102585859 | MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0ZLH2 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| EnsemblPlantsGene:PGSC0003DMG400001323 | PGSC:PGSC0003DMG400001323 | EnsemblPlants:PGSC0003DMT400003343 | PFscan:PS51005 | PANTHER:PTHR44574 | PANTHER:PTHR44574:SF1 |
| SUPFAM:SSF101941 | UniParc:UPI00029554F8 | RefSeq:XP_006338456.1 | : | : | : |
Description
NAC domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001323]
Coordinates
chr2:-:46255831..46258219
Molecular Weight (calculated)
44760.1 Da
IEP (calculated)
5.825
GRAVY (calculated)
-0.634
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDKSDVEKL DEVMLPGFRF HPTDEELVGF YLKRKIQQRS LPIELIKQVD IYKYDPWDLP KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT
101: DRPIYSSDST KCIGLKKSLV FYRGRAARGI KTDWMMHEFR LPTTNSESGP PKKFLDKNFP PNDSWAICRI FKKTSSMANR ALSYTWVNPL SEVASPELFN
201: QSANTHFISE NVSSITEAGS VLHLSNNSDL LQGVSNVPSY KALNTMASRQ SYLSSPSTDI SYNFMFSSPE VSGQNSRCLL DANSMFFNTS PGLITDISKT
301: SESIDFDGPN QQLNSFSISS SQEMQRSISM EDGEEGLRSN QTSTNDNTEW ENMRSVGFPF SLTASLADEW KPSLSWDSPP CPSEISTSFS TNKCYN
101: DRPIYSSDST KCIGLKKSLV FYRGRAARGI KTDWMMHEFR LPTTNSESGP PKKFLDKNFP PNDSWAICRI FKKTSSMANR ALSYTWVNPL SEVASPELFN
201: QSANTHFISE NVSSITEAGS VLHLSNNSDL LQGVSNVPSY KALNTMASRQ SYLSSPSTDI SYNFMFSSPE VSGQNSRCLL DANSMFFNTS PGLITDISKT
301: SESIDFDGPN QQLNSFSISS SQEMQRSISM EDGEEGLRSN QTSTNDNTEW ENMRSVGFPF SLTASLADEW KPSLSWDSPP CPSEISTSFS TNKCYN
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.