Factsheet for PGSC0003DMT400022365

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g061780.2.1	Tomato	nucleus	93.88	94.26
GSMUA_Achr5P19060_001	Banana	nucleus	45.71	45.9
GSMUA_Achr11P...	Banana	nucleus	48.16	45.04
GSMUA_AchrUn_...	Banana	nucleus	47.76	44.83
GSMUA_Achr1P02710_001	Banana	nucleus	48.98	44.12
Zm00001d014843_P001	Maize	nucleus	45.71	41.79
GSMUA_Achr7P04030_001	Banana	nucleus	48.16	41.4
PGSC0003DMT400028190	Potato	nucleus	48.57	41.18
Os03t0133000-01	Rice	nucleus	53.06	41.14
VIT_04s0008g00150.t01	Wine grape	nucleus	46.53	40.86
GSMUA_Achr3P00560_001	Banana	nucleus	46.12	40.5
GSMUA_Achr3P14720_001	Banana	nucleus	47.35	40.14
Os06t0726300-01	Rice	nucleus	46.94	39.38
Zm00001d048347_P001	Maize	nucleus	50.61	39.12
EER92917	Sorghum	nucleus	51.43	38.53
Zm00001d027530_P001	Maize	nucleus	51.02	38.46
TraesCS7B01G472200.1	Wheat	cytosol, nucleus, plastid	46.12	38.05
TraesCS7D01G535300.1	Wheat	cytosol, nucleus, plastid	46.12	37.92
TraesCS7A01G549000.1	Wheat	cytosol, nucleus, plastid	45.31	37.37
TraesCS7B01G472600.1	Wheat	cytosol, nucleus, plastid	45.71	37.33
TraesCS5A01G500500.1	Wheat	nucleus	51.02	36.98
TraesCS4B01G328800.1	Wheat	nucleus	51.43	36.31
TraesCS4D01G325700.1	Wheat	nucleus	51.43	36.31
GSMUA_Achr1P18110_001	Banana	cytosol, nucleus, plastid	31.84	35.94
TraesCS4B01G328700.1	Wheat	nucleus	51.43	35.69
TraesCS5A01G500400.1	Wheat	nucleus	50.61	35.63
TraesCS4B01G328600.1	Wheat	nucleus	51.02	35.61
TraesCS4D01G325800.1	Wheat	nucleus	51.43	35.59
Zm00001d036364_P001	Maize	nucleus	47.35	35.58
HORVU4Hr1G081450.1	Barley	nucleus	51.43	35.39
TraesCS4B01G329100.1	Wheat	nucleus	50.61	35.23
TraesCS4B01G328900.1	Wheat	nucleus	50.61	35.23
TraesCS5A01G500700.1	Wheat	nucleus	51.02	35.11
HORVU4Hr1G081430.1	Barley	cytosol, nucleus	51.02	33.78
TraesCS5A01G500600.1	Wheat	nucleus	50.61	33.6
HORVU4Hr1G081440.3	Barley	nucleus	51.84	33.42
KXG20943	Sorghum	nucleus, plastid	47.35	30.05
PGSC0003DMT400003082	Potato	nucleus	33.47	29.08
PGSC0003DMT400007341	Potato	mitochondrion	33.47	28.98
PGSC0003DMT400047440	Potato	nucleus	32.24	28.01
PGSC0003DMT400090327	Potato	cytosol	31.84	27.46
PGSC0003DMT400023917	Potato	nucleus	31.84	26.8
PGSC0003DMT400054407	Potato	nucleus	34.29	26.75
PGSC0003DMT400047021	Potato	nucleus	44.08	26.73
PGSC0003DMT400045294	Potato	nucleus	32.24	26.69
PGSC0003DMT400082472	Potato	nucleus	30.2	24.42
PGSC0003DMT400049664	Potato	nucleus	33.47	24.19
PGSC0003DMT400064428	Potato	nucleus	34.29	23.93
PGSC0003DMT400093822	Potato	nucleus	28.57	23.57
PGSC0003DMT400080307	Potato	nucleus	36.73	23.26
PGSC0003DMT400003343	Potato	nucleus	37.14	22.98
PGSC0003DMT400049124	Potato	nucleus	22.86	22.4
PGSC0003DMT400039670	Potato	nucleus	31.43	21.94
PGSC0003DMT400049665	Potato	nucleus	31.43	21.63
PGSC0003DMT400048237	Potato	nucleus	29.8	14.93

Protein Annotations

EntrezGene:102591339	MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:M1AGL4	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
EnsemblPlantsGene:PGSC0003DMG400008677	PGSC:PGSC0003DMG400008677	EnsemblPlants:PGSC0003DMT400022365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF2
SUPFAM:SSF101941	UniParc:UPI000295111C	RefSeq:XP_006367161.1	:	:	:

Description

NAC domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008677]

Coordinates

chr2:-:19546614..19550028

Molecular Weight (calculated)

28244.5 Da

IEP (calculated)

6.890

GRAVY (calculated)

-0.586

Length

245 amino acids

Sequence
(BLAST)

001: MSLTELELPG FRFHPTEEEL INFYLKRIIN DDKIDSNTIG FLNIYLYDPW ELPGMARIGE REWYFFVPIN RKHGPKGRPN RTTRSGFWKA TGSDRQIRSS
101: LEPKKAIGLK KTLVFYGGRA PKGTRTDWVM NEYRLPHGHK DHDIVLCKVY RKATSFKVLE ERAMIEEDAA KPYLASAAPH DESQDMLVSL ESSSKNDMYF
201: KSCEEENHEL LGSNAFVEPP KFSIDSLSSP LWSTGQDLWT LFSLS

Best Arabidopsis Sequence Match ( AT2G17040.1 )
(BLAST)

001: MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW

Arabidopsis Description

anac036NAC domain containing protein 36 [Source:UniProtKB/TrEMBL;Acc:F4IME8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.