Factsheet for GSMUA_Achr4P10310_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02390_001	Banana	nucleus	68.94	76.52
GSMUA_Achr7P21780_001	Banana	nucleus	77.82	76.51
HORVU3Hr1G094170.1	Barley	nucleus	28.33	65.35
GSMUA_Achr10P...	Banana	cytosol	62.46	60.2
GSMUA_Achr5P07590_001	Banana	nucleus	59.39	60.0
VIT_06s0004g00020.t01	Wine grape	nucleus	55.63	54.88
Os07t0225300-01	Rice	nucleus	50.85	53.99
Os01t0816100-01	Rice	nucleus	58.02	53.46
TraesCS6B01G075200.1	Wheat	nucleus	51.54	52.98
EER96087	Sorghum	nucleus	52.22	52.76
Zm00001d012527_P001	Maize	cytosol, mitochondrion, nucleus	55.29	52.6
TraesCS3B01G371200.1	Wheat	nucleus	55.97	52.56
EES03797	Sorghum	nucleus	56.66	52.53
TraesCS3A01G339600.1	Wheat	nucleus	55.97	52.23
Os03t0815100-01	Rice	nucleus	55.97	51.9
TraesCS3D01G333100.1	Wheat	nucleus	55.97	51.9
Zm00001d034601_P001	Maize	nucleus	54.95	51.6
HORVU4Hr1G089660.1	Barley	cytosol, nucleus	39.93	51.54
TraesCS6A01G057400.1	Wheat	nucleus	50.85	51.38
EER93215	Sorghum	nucleus	55.63	51.1
Zm00001d019207_P001	Maize	nucleus	52.22	51.0
Zm00001d005208_P001	Maize	nucleus	52.56	50.83
TraesCS5D01G481200.1	Wheat	nucleus	56.31	50.77
TraesCS5B01G480900.2	Wheat	nucleus	56.31	50.46
TraesCS5A01G468300.1	Wheat	nucleus	56.31	50.46
HORVU5Hr1G111590.2	Barley	nucleus	56.31	50.0
GSMUA_Achr7P21770_001	Banana	nucleus	33.79	49.5
GSMUA_Achr6P32330_001	Banana	cytosol	44.37	48.15
HORVU2Hr1G004130.1	Barley	cytosol, nucleus	45.73	47.86
GSMUA_Achr10P...	Banana	nucleus	40.27	46.27
GSMUA_Achr6P18720_001	Banana	nucleus	40.96	43.8
GSMUA_Achr7P23250_001	Banana	nucleus	39.93	43.66
Zm00001d013003_P001	Maize	nucleus, plastid	54.61	43.6
GSMUA_Achr6P25380_001	Banana	nucleus	39.93	42.7
TraesCS6D01G059300.1	Wheat	nucleus, plastid	51.19	42.49
GSMUA_Achr6P17720_001	Banana	nucleus	40.27	40.69
GSMUA_Achr10P...	Banana	nucleus	37.54	36.42
GSMUA_Achr9P19520_001	Banana	nucleus	39.25	35.28
GSMUA_AchrUn_...	Banana	nucleus	39.25	35.17
GSMUA_Achr3P18990_001	Banana	plastid	39.59	34.83
GSMUA_Achr4P02380_001	Banana	nucleus	39.25	34.43
GSMUA_Achr5P19060_001	Banana	nucleus	27.99	33.61
GSMUA_Achr6P32320_001	Banana	nucleus	38.91	33.04
GSMUA_Achr1P08860_001	Banana	nucleus	40.27	32.87
GSMUA_Achr7P00860_001	Banana	nucleus	28.67	32.06
GSMUA_Achr11P...	Banana	nucleus	28.33	31.68
GSMUA_AchrUn_...	Banana	nucleus	27.65	31.03
GSMUA_Achr10P...	Banana	cytosol	27.99	30.71
GSMUA_Achr3P18010_001	Banana	nucleus	38.57	30.71
GSMUA_Achr1P02710_001	Banana	nucleus	28.33	30.51
GSMUA_Achr4P23030_001	Banana	nucleus	25.6	30.0
GSMUA_Achr4P32010_001	Banana	nucleus	28.67	29.27
GSMUA_Achr7P04030_001	Banana	nucleus	28.33	29.12
GSMUA_Achr1P18110_001	Banana	cytosol, nucleus, plastid	21.16	28.57
GSMUA_Achr3P00560_001	Banana	nucleus	26.62	27.96
GSMUA_Achr9P10040_001	Banana	nucleus	28.67	27.63
GSMUA_Achr3P14720_001	Banana	nucleus	26.96	27.34
GSMUA_Achr9P04960_001	Banana	nucleus	36.52	26.95
GSMUA_Achr5P17060_001	Banana	nucleus	25.94	26.95
GSMUA_Achr5P02170_001	Banana	nucleus	27.3	26.06
GSMUA_Achr11P...	Banana	nucleus	27.99	25.79
GSMUA_Achr10P...	Banana	nucleus	28.33	25.38
GSMUA_Achr11P...	Banana	nucleus	27.65	24.18
GSMUA_Achr10P...	Banana	nucleus	27.3	23.6
GSMUA_Achr3P21690_001	Banana	nucleus	28.67	23.6
GSMUA_Achr7P23650_001	Banana	nucleus	27.65	23.28
GSMUA_Achr6P02680_001	Banana	nucleus	30.38	23.12
GSMUA_Achr10P...	Banana	cytosol	27.3	18.96

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G10310_001
EnsemblPlants:GSMUA_Achr4P10310_001	EnsemblPlants:GSMUA_Achr4T10310_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0SMP8	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31719	PANTHER:PTHR31719:SF80	SUPFAM:SSF101941
UniParc:UPI000294B2E2	:	:	:	:	:

Description

NAC domain-containing protein 68 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10310_001]

Coordinates

chr4:+:7489208..7490629

Molecular Weight (calculated)

33450.6 Da

IEP (calculated)

7.965

GRAVY (calculated)

-0.764

Length

293 amino acids

Sequence
(BLAST)

001: MGRKRDAEAE LNLPPGFRFH PTDEELVVHY LCRKMACLCL PAPIIVDIDL YKHNPWELPD KASFGQREWY FFTPRNRKYL NGSRPNRAAG KGYWKATGAD
101: KPISAKGSER TLGIKKALVF YTGKAPRGVK TDWIMHEYRL ADASRSSNKG SLRLDDWVLC RLYNKKNTWE KMQQQQETSS GETMGSVGET GSDSLRTPEF
201: DVEHKVGLPY FDDLGYPSQA AARMQASSNS KTTAGIQMAE ESQKEDNEWF MDLKLDDLQS SYMNVRSMQM MDATNQDFVP PVPRPNHTDM LPF

Best Arabidopsis Sequence Match ( AT1G01720.1 )
(BLAST)

001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY

Arabidopsis Description

NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.