Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr4P02390_001 | Banana | nucleus | 60.34 | 66.29 |
HORVU3Hr1G094170.1 | Barley | nucleus | 28.62 | 65.35 |
GSMUA_Achr7P21780_001 | Banana | nucleus | 65.17 | 63.42 |
GSMUA_Achr4P10310_001 | Banana | nucleus | 60.0 | 59.39 |
Os01t0816100-01 | Rice | nucleus | 63.45 | 57.86 |
EER96087 | Sorghum | nucleus | 57.24 | 57.24 |
Zm00001d012527_P001 | Maize | cytosol, mitochondrion, nucleus | 60.69 | 57.14 |
VIT_06s0004g00020.t01 | Wine grape | nucleus | 58.28 | 56.9 |
Zm00001d034601_P001 | Maize | nucleus | 60.69 | 56.41 |
Os03t0815100-01 | Rice | nucleus | 60.69 | 55.7 |
Zm00001d019207_P001 | Maize | nucleus | 57.59 | 55.67 |
EES03797 | Sorghum | nucleus | 60.34 | 55.38 |
EER93215 | Sorghum | nucleus | 60.69 | 55.17 |
Zm00001d005208_P001 | Maize | nucleus | 57.59 | 55.12 |
TraesCS6B01G075200.1 | Wheat | nucleus | 54.14 | 55.09 |
Os07t0225300-01 | Rice | nucleus | 52.41 | 55.07 |
GSMUA_Achr10P... | Banana | cytosol | 57.24 | 54.61 |
TraesCS3B01G371200.1 | Wheat | nucleus | 58.62 | 54.49 |
TraesCS3A01G339600.1 | Wheat | nucleus | 58.62 | 54.14 |
TraesCS3D01G333100.1 | Wheat | nucleus | 58.62 | 53.8 |
HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 41.72 | 53.3 |
TraesCS6A01G057400.1 | Wheat | nucleus | 53.1 | 53.1 |
TraesCS5D01G481200.1 | Wheat | nucleus | 58.28 | 52.0 |
TraesCS5B01G480900.2 | Wheat | nucleus | 58.62 | 51.99 |
GSMUA_Achr6P32330_001 | Banana | cytosol | 48.28 | 51.85 |
TraesCS5A01G468300.1 | Wheat | nucleus | 58.28 | 51.68 |
GSMUA_Achr7P21770_001 | Banana | nucleus | 35.52 | 51.5 |
HORVU5Hr1G111590.2 | Barley | nucleus | 58.28 | 51.21 |
GSMUA_Achr10P... | Banana | nucleus | 44.14 | 50.2 |
HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 46.21 | 47.86 |
GSMUA_Achr6P18720_001 | Banana | nucleus | 44.14 | 46.72 |
Zm00001d013003_P001 | Maize | nucleus, plastid | 58.97 | 46.59 |
GSMUA_Achr6P25380_001 | Banana | nucleus | 43.1 | 45.62 |
GSMUA_Achr6P17720_001 | Banana | nucleus | 45.17 | 45.17 |
GSMUA_Achr7P23250_001 | Banana | nucleus | 41.72 | 45.15 |
TraesCS6D01G059300.1 | Wheat | nucleus, plastid | 53.79 | 44.19 |
GSMUA_Achr3P18990_001 | Banana | plastid | 44.14 | 38.44 |
GSMUA_Achr4P02380_001 | Banana | nucleus | 43.1 | 37.43 |
GSMUA_Achr10P... | Banana | nucleus | 38.97 | 37.42 |
GSMUA_AchrUn_... | Banana | nucleus | 41.72 | 37.0 |
GSMUA_Achr9P19520_001 | Banana | nucleus | 40.0 | 35.58 |
GSMUA_Achr1P08860_001 | Banana | nucleus | 42.76 | 34.54 |
GSMUA_Achr6P32320_001 | Banana | nucleus | 41.03 | 34.49 |
GSMUA_Achr7P00860_001 | Banana | nucleus | 30.0 | 33.21 |
GSMUA_Achr11P... | Banana | nucleus | 29.31 | 32.44 |
GSMUA_Achr5P19060_001 | Banana | nucleus | 27.24 | 32.38 |
GSMUA_Achr3P18010_001 | Banana | nucleus | 41.03 | 32.34 |
GSMUA_AchrUn_... | Banana | nucleus | 28.62 | 31.8 |
GSMUA_Achr4P23030_001 | Banana | nucleus | 27.24 | 31.6 |
GSMUA_Achr1P02710_001 | Banana | nucleus | 28.97 | 30.88 |
GSMUA_Achr10P... | Banana | cytosol | 28.28 | 30.71 |
GSMUA_Achr4P32010_001 | Banana | nucleus | 29.66 | 29.97 |
GSMUA_Achr3P00560_001 | Banana | nucleus | 28.62 | 29.75 |
GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 22.07 | 29.49 |
GSMUA_Achr9P04960_001 | Banana | nucleus | 40.34 | 29.47 |
GSMUA_Achr7P04030_001 | Banana | nucleus | 28.62 | 29.12 |
GSMUA_Achr5P02170_001 | Banana | nucleus | 30.69 | 28.99 |
GSMUA_Achr5P17060_001 | Banana | nucleus | 27.93 | 28.72 |
GSMUA_Achr3P14720_001 | Banana | nucleus | 28.28 | 28.37 |
GSMUA_Achr9P10040_001 | Banana | nucleus | 29.31 | 27.96 |
GSMUA_Achr11P... | Banana | nucleus | 30.0 | 27.36 |
GSMUA_Achr10P... | Banana | nucleus | 30.0 | 26.61 |
GSMUA_Achr10P... | Banana | nucleus | 29.31 | 25.07 |
GSMUA_Achr11P... | Banana | nucleus | 28.62 | 24.78 |
GSMUA_Achr3P21690_001 | Banana | nucleus | 30.0 | 24.44 |
GSMUA_Achr7P23650_001 | Banana | nucleus | 29.31 | 24.43 |
GSMUA_Achr6P02680_001 | Banana | nucleus | 32.07 | 24.16 |
GSMUA_Achr10P... | Banana | cytosol | 28.97 | 19.91 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G07590_001 |
EnsemblPlants:GSMUA_Achr5P07590_001 | EnsemblPlants:GSMUA_Achr5T07590_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0SWI8 | InterPro:NAC-dom |
InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF80 | SUPFAM:SSF101941 |
UniParc:UPI000295EBB5 | : | : | : | : | : |
Description
NAC domain-containing protein 68 [Source:GMGC_GENE;Acc:GSMUA_Achr5G07590_001]
Coordinates
chr5:-:5446773..5448236
Molecular Weight (calculated)
33124.7 Da
IEP (calculated)
5.482
GRAVY (calculated)
-0.738
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVMGRERDA EAELNLPPGF RFHPTDEELV VHYLCRRAAG QRLPVPIIRE VDLYKYDPWD LPEMALFGQR EWYFFTPRDR KYPNGSRPNR TAGRGYWKAT
101: GADKPVSPPG SSRPLGIKKA LVFYQGKAPK GVKTDWIMHE YRLADTDRSA NKKGSRRLDD WVLCRLYNKK NNWEKTQQKK AVAASFGRTM DSFVATDDTR
201: SDSLWTTESD IEHDASLEFG DPSNFQIVEG MKEEADDWFT DLNLDEFQGA LAAIGPTTSV ADISDQDYYS SILGSPYLNQ SQINMPPFWS
101: GADKPVSPPG SSRPLGIKKA LVFYQGKAPK GVKTDWIMHE YRLADTDRSA NKKGSRRLDD WVLCRLYNKK NNWEKTQQKK AVAASFGRTM DSFVATDDTR
201: SDSLWTTESD IEHDASLEFG DPSNFQIVEG MKEEADDWFT DLNLDEFQGA LAAIGPTTSV ADISDQDYYS SILGSPYLNQ SQINMPPFWS
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.