Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P17470_001 | Banana | cytosol | 60.57 | 63.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.58 | 56.93 |
| Zm00001d014297_P006 | Maize | cytosol | 56.51 | 48.88 |
| GSMUA_Achr10P... | Banana | cytosol | 48.03 | 44.28 |
| GSMUA_Achr8P22930_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 45.82 | 43.99 |
| GSMUA_Achr7P11260_001 | Banana | mitochondrion | 48.28 | 43.14 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 50.0 | 41.74 |
| GSMUA_Achr4P15980_001 | Banana | cytosol | 49.51 | 40.38 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 48.77 | 39.78 |
| Bra013186.1-P | Field mustard | plasma membrane | 52.46 | 38.92 |
| CDX93074 | Canola | plasma membrane | 52.46 | 38.92 |
| CDY50037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 52.21 | 38.67 |
| Os10t0362300-03 | Rice | extracellular | 55.65 | 38.16 |
| KRH74010 | Soybean | mitochondrion, plasma membrane | 56.14 | 37.43 |
| KRH14106 | Soybean | mitochondrion | 55.77 | 37.06 |
| VIT_12s0057g00690.t01 | Wine grape | endoplasmic reticulum, golgi | 57.62 | 36.87 |
| Solyc07g047770.2.1 | Tomato | golgi | 55.77 | 36.76 |
| Bra035381.1-P | Field mustard | cytosol, golgi, plasma membrane | 51.84 | 36.73 |
| CDX74635 | Canola | cytosol, golgi, plasma membrane | 51.84 | 36.73 |
| CDY47297 | Canola | plasma membrane | 51.72 | 36.64 |
| AT5G35750.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 52.46 | 36.31 |
| PGSC0003DMT400015729 | Potato | cytosol | 12.53 | 27.72 |
| GSMUA_Achr5P00120_001 | Banana | cytosol | 8.85 | 20.11 |
| GSMUA_Achr1P23390_001 | Banana | cytosol | 18.92 | 17.62 |
| GSMUA_Achr11P... | Banana | cytosol | 11.55 | 14.8 |
| GSMUA_Achr5P21290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.44 | 14.73 |
| GSMUA_Achr7P26840_001 | Banana | plasma membrane | 11.67 | 14.33 |
| GSMUA_Achr11P... | Banana | plasma membrane | 13.27 | 14.25 |
| GSMUA_Achr3P22920_001 | Banana | extracellular | 16.58 | 14.06 |
| GSMUA_Achr11P... | Banana | cytosol | 6.27 | 13.86 |
| GSMUA_Achr8P14350_001 | Banana | endoplasmic reticulum | 12.04 | 12.95 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 10.32 | 12.88 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.4.2.1 | Gene3D:3.30.450.350 | Gene3D:3.30.565.10 | Gene3D:3.40.50.2300 | InterPro:CHASE_dom |
| InterPro:CheY-like_superfamily | GO:GO:0000155 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0023014 | GO:GO:0038023 | EnsemblPlantsGene:GSMUA_Achr1G22740_001 | EnsemblPlants:GSMUA_Achr1P22740_001 |
| EnsemblPlants:GSMUA_Achr1T22740_001 | InterPro:HATPase_C_sf | InterPro:HisK_dim/P | InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom | InterPro:IPR001789 |
| InterPro:IPR005467 | InterPro:IPR006189 | InterPro:IPR036890 | UniProt:M0S282 | PFAM:PF00072 | PFAM:PF00512 |
| PFAM:PF03924 | PFscan:PS50109 | PFscan:PS50110 | PFscan:PS50839 | PANTHER:PTHR43719 | PANTHER:PTHR43719:SF16 |
| SMART:SM00388 | SMART:SM00448 | SMART:SM01079 | SUPFAM:SSF47384 | SUPFAM:SSF52172 | SUPFAM:SSF55874 |
| InterPro:Sig_transdc_resp-reg_receiver | TMHMM:TMhelix | UniParc:UPI000296E90C | SEG:seg | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_57.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr1G22740_001]
Coordinates
chr1:-:17115060..17121983
Molecular Weight (calculated)
91718.7 Da
IEP (calculated)
7.550
GRAVY (calculated)
0.023
Length
814 amino acids
Sequence
(BLAST)
(BLAST)
001: MWIFVSMNAN ITERRKDTLV NMCDESKRAR MLQDQFNVSM NHVHALAILV LTFHHRKQHS SFWQKIFAEY TARTAFERPL MSRVAYALRV LHTERGRFEQ
101: QHAWQIKKME TEFQSLVKDD YNPEKLDPSP VQDEYAPVIF SQETVSHIVS IDMMSGKTEN ILRARAARKG VLTSCNLLKS NHLGVVLTFA VYKTNLPLNA
201: APQERIETTV GYLRASFDVP SLVEKLLQQL ASKQTIIVNL YDTTNVSAPI RMYGPDTAAS GEKHISYVDF GDPTRKHEMH CRFKHKPPLP WSAITMSVGV
301: AVIVLVGHIF HAALNRIEEV EDDYCQMREL KVQAESADVA KSQFLATVSH EIRTRMNGVL GMLQMLMDTD LDATQQDFAM TAQSSGKALI ALINEVLDQA
401: KIESGRLELE AVPFDLRDVL DNVLSLFSDK SQAKGIEMAV YVSERVPEIL IGDPGRLRQI ITNLLGNSVK VNCSSNFLII QLKLDLVVWY SYGEIETLHL
501: VPYWMCAIPV IFSSIIGTIS LVSSASHACF QEYKYILDTL IVDLVFKFSW VVALFSFIMM KKIILLQTWY FSCLSCACYP SFSLLKFSMG HLDVVIICLK
601: LSDKKKPCIT GNACFFFRSV EESVLTWKNG AAMPLGSLPN MFLEVTSQSP TEVHELKSAG YVDSILKPLH PGIIATCLWK ALGMEHKRQQ FKGKSMPLQS
701: LLSGKNILVV DDNAINCKVA AAVLEKYGAT VTSADSGKEA IKMLQPPHNF DACFMDVKMP EMDGFEATRQ IRLMENIVNE LIRSGGCITG IIWQCSSLAH
801: TYTSYYSRRY SSNT
101: QHAWQIKKME TEFQSLVKDD YNPEKLDPSP VQDEYAPVIF SQETVSHIVS IDMMSGKTEN ILRARAARKG VLTSCNLLKS NHLGVVLTFA VYKTNLPLNA
201: APQERIETTV GYLRASFDVP SLVEKLLQQL ASKQTIIVNL YDTTNVSAPI RMYGPDTAAS GEKHISYVDF GDPTRKHEMH CRFKHKPPLP WSAITMSVGV
301: AVIVLVGHIF HAALNRIEEV EDDYCQMREL KVQAESADVA KSQFLATVSH EIRTRMNGVL GMLQMLMDTD LDATQQDFAM TAQSSGKALI ALINEVLDQA
401: KIESGRLELE AVPFDLRDVL DNVLSLFSDK SQAKGIEMAV YVSERVPEIL IGDPGRLRQI ITNLLGNSVK VNCSSNFLII QLKLDLVVWY SYGEIETLHL
501: VPYWMCAIPV IFSSIIGTIS LVSSASHACF QEYKYILDTL IVDLVFKFSW VVALFSFIMM KKIILLQTWY FSCLSCACYP SFSLLKFSMG HLDVVIICLK
601: LSDKKKPCIT GNACFFFRSV EESVLTWKNG AAMPLGSLPN MFLEVTSQSP TEVHELKSAG YVDSILKPLH PGIIATCLWK ALGMEHKRQQ FKGKSMPLQS
701: LLSGKNILVV DDNAINCKVA AAVLEKYGAT VTSADSGKEA IKMLQPPHNF DACFMDVKMP EMDGFEATRQ IRLMENIVNE LIRSGGCITG IIWQCSSLAH
801: TYTSYYSRRY SSNT
0001: MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES
Arabidopsis Description
AHK3HK3 [Source:UniProtKB/TrEMBL;Acc:A0A178WL02]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.