Factsheet for GSMUA_Achr4P32370_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT5G42650.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT5G42650.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02880_001	Banana	plastid	71.37	69.55
EER90827	Sorghum	plastid	66.73	64.65
Zm00001d013185_P001	Maize	plastid	66.53	64.58
Os03t0767000-01	Rice	plastid	66.53	64.45
KRH15274	Soybean	cytosol	54.23	64.35
Zm00001d034186_P001	Maize	plastid	67.14	64.16
Zm00001d034184_P001	Maize	plasma membrane, plastid	66.13	63.57
TraesCS5D01G413200.1	Wheat	plastid	63.51	62.01
TraesCS5B01G408000.1	Wheat	plastid	63.71	61.6
TraesCS5A01G403200.1	Wheat	plastid	62.7	61.22
HORVU5Hr1G098090.1	Barley	plastid	62.1	60.63
KRH05758	Soybean	nucleus, plastid	63.31	60.5
KRH61218	Soybean	nucleus, plastid	61.9	58.93
Solyc04g079730.1.1	Tomato	plastid	62.3	57.87
PGSC0003DMT400002934	Potato	plastid	59.48	57.84
PGSC0003DMT400043495	Potato	plastid	61.09	57.17
AT5G42650.1	Thale cress	plastid	59.68	57.14
VIT_18s0001g11630.t01	Wine grape	plastid	59.88	57.12
CDY23912	Canola	plastid	59.68	55.95
CDY02409	Canola	plastid	59.68	55.95
Bra035320.1-P	Field mustard	plastid	59.48	55.77
GSMUA_Achr8P04830_001	Banana	cytosol	47.18	55.32
Solyc11g069800.1.1	Tomato	plastid	56.85	55.29
GSMUA_Achr6P13520_001	Banana	plastid	38.51	41.34
KRH38153	Soybean	plastid	9.07	35.16
GSMUA_Achr2P13300_001	Banana	cytosol	71.98	28.24
GSMUA_Achr5P08810_001	Banana	cytosol	48.99	27.96

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G32370_001	EnsemblPlants:GSMUA_Achr4P32370_001
EnsemblPlants:GSMUA_Achr4T32370_001	InterPro:IPR036396	UniProt:M0STZ9	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF50	SUPFAM:SSF48264	UniParc:UPI000294C0FE	SEG:seg	:	:

Description

Allene oxide synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G32370_001]

Coordinates

chr4:+:29171657..29173389

Molecular Weight (calculated)

54835.9 Da

IEP (calculated)

9.150

GRAVY (calculated)

-0.071

Length

496 amino acids

Sequence
(BLAST)

001: MATASLAFST PSPLQFRSHR RRRTASIRAS VSESPVTATP SSSSSASPSS KLPLRKIPGD YGLPLIGPLQ DRLAYFYWEG RDEFFKTRVR RYGSTVFRAN
101: MPPGPFLASD PRVIVLLDAA SFPVLFDTSL VEKRDVFTGT FMPSTELTGG FRVLSYLDPS EPNHAPLKRL LFFLLSHRRQ AGKADFGDAN DRASFDFLAR
201: AFFERDPKDT ELGLDGPGLI TKWVLFQLGP LLTLGLPSYL EDLFLHSFRL PPALIRGDYD RLVAFFRESA GPVLDEAERM GISREEAVHN ILFATCFNTF
301: GGMKILFPGL VKLVGRAGAQ LHGRLAQEIR AAVRDVGGGE VTMRAIEAMP LTASAAYEAL RIEPPVPMQY GRAKRDMVVT SHDAAFEVRA GEMLFGYQPF
401: ATKDARVFDR PQEFVADRFV GAEGASLLRY VVWSNGPETE SPSTENKQCA GKDFVVLMAR LLLVELFLRY DSFEVEVGAS ALGSSVKLTS LKKATF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.