Factsheet for GSMUA_Achr5P08810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P04830_001	Banana	cytosol	30.38	62.41
Os03t0225900-01	Rice	mitochondrion, plastid	33.14	60.25
TraesCS4D01G238800.1	Wheat	cytosol, golgi	32.91	59.34
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	32.91	59.34
TraesCS4B01G237600.1	Wheat	cytosol, plastid	32.8	59.13
TraesCS4A01G061800.1	Wheat	plastid	32.57	58.96
TraesCS4D01G238700.1	Wheat	plastid	32.45	58.75
TraesCS4B01G237500.1	Wheat	plastid	32.45	58.75
HORVU4Hr1G066270.1	Barley	plasma membrane	32.8	58.52
HORVU4Hr1G066230.1	Barley	plastid	32.22	58.33
OQU92970	Sorghum	cytosol	32.34	58.18
Zm00001d028282_P001	Maize	plastid	32.11	57.88
Zm00001d048021_P001	Maize	plasma membrane	31.65	57.05
VIT_03s0063g01840.t01	Wine grape	cytosol	14.5	56.25
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	29.11	51.95
GSMUA_Achr4P32370_001	Banana	plastid	27.96	48.99
VIT_03s0063g01860.t01	Wine grape	plastid	27.16	48.86
VIT_03s0063g01850.t01	Wine grape	plastid	26.58	47.83
KRH29541	Soybean	endoplasmic reticulum	25.2	45.82
Solyc01g109150.2.1	Tomato	cytosol	25.89	45.55
Solyc10g007960.1.1	Tomato	cytosol	25.43	45.01
PGSC0003DMT400027377	Potato	cytosol	25.43	45.01
GSMUA_Achr8P02880_001	Banana	plastid	26.24	44.79
Solyc01g109160.2.1	Tomato	cytosol	24.86	44.26
Solyc01g109140.2.1	Tomato	nucleus	23.94	43.51
PGSC0003DMT400064771	Potato	cytosol	23.94	43.51
VIT_03s0063g01830.t01	Wine grape	plastid	28.54	43.36
KRH49555	Soybean	endoplasmic reticulum	25.78	42.91
GSMUA_Achr6P13520_001	Banana	plastid	21.63	40.69
PGSC0003DMT400064773	Potato	cytosol	19.79	37.8
GSMUA_Achr2P13300_001	Banana	cytosol	25.55	17.56

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G08810_001	EnsemblPlants:GSMUA_Achr5P08810_001	EnsemblPlants:GSMUA_Achr5T08810_001	InterPro:GTD-bd
InterPro:IPR007656	InterPro:IPR036396	UniProt:M0SWW0	PFAM:PF00067	PFAM:PF04576	PFscan:PS51775
PANTHER:PTHR24286	PANTHER:PTHR24286:SF95	SUPFAM:SSF48264	UniParc:UPI0002954E30	SEG:seg	:

Description

Allene oxide synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G08810_001]

Coordinates

chr5:+:6392344..6400217

Molecular Weight (calculated)

96651.1 Da

IEP (calculated)

7.081

GRAVY (calculated)

-0.193

Length

869 amino acids

Sequence
(BLAST)

001: MSMILRLQRE KAEVQMEARQ FKGFAEEKMA HDRQEIAALE DLLLKYDETI LSLSYEVETY RHRLFSSGIG VSDAPASEPE SPDEATTADA QFDFSCGDYP
101: PLRSTLSADD ATIDIYKYPF GETPREHLNK LEARISQLER MPSCGQMSNV VDKMVAMGHS PHRPIHIKRL SVDSCGSSLE FNKGEEFPIT MDLSSDCGVQ
201: DDMSDRVYTI DTMHKAAEDY VSLARVVHNE KDTNGSDEEA EIRKLRLRLE ALEADRESMR KTLISIATDK TQVVMLNDIA QHLREDASSE KIVKKQPFLK
301: RFSLMLIIKA AVSFVFRRKR SSRIRQVFGL SANNAGLLLL LDRAARMRHQ RFFTKTQGEL PTFHTRPKSS SQHADESISL ALYSLILATI SVPSTELTTM
401: ATGMVEKKVD DDKAAPSIIC SLPIKEIPGS RNHSLVSRIK TRLEFYYKQR EEEFFRSRIA AHGSTVFRIN MPPGPFMAAN SRVVALLDAK SFRVLLDVSK
501: VEKKNVLTGT FVPPVSLTGG HRMCAYLDPS EPDHARVKQL VFNLVAARKN FFIPSDFNKL SDAAVFDYFG EACFGVRPSA TALGATGPTK ATKWLFPQIA
601: PLMTLGLPTL LEELFLHTFP LPSCLFSSDY KALYRYFESA ASSTLDDAEK LGLNRKEACH HILFVAIFNA FGGFKAALPG IFGLVAEAGP SLHSQLAEEI
701: RSAVAAEGGE VTLAAVERME LTRSVVYEAL RLDPPVKYQY GKAKADLIIE SHDAAYQVKK GEMLLGYQPC ATKDPKVFGP NAGEFVADRF VGNAGRKLLE
801: YVVWSNGPET EEPTVGNKQC AGKYLVVLVG RLLLVEFFLR YDTFTADVGS VLLGKQVNVT SLSKPTVQS

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.