Factsheet for VIT_03s0063g01830.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01840.t01	Wine grape	cytosol	36.89	94.2
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	71.5	83.98
VIT_03s0063g01860.t01	Wine grape	plastid	64.51	76.4
VIT_03s0063g01850.t01	Wine grape	plastid	63.81	75.57
Solyc01g109160.2.1	Tomato	cytosol	52.8	61.89
KRH29541	Soybean	endoplasmic reticulum	51.4	61.51
Solyc01g109150.2.1	Tomato	cytosol	52.62	60.93
Solyc10g007960.1.1	Tomato	cytosol	50.17	58.45
PGSC0003DMT400027377	Potato	cytosol	50.17	58.45
GSMUA_Achr8P04830_001	Banana	cytosol	43.18	58.39
KRH49555	Soybean	endoplasmic reticulum	50.17	54.98
Os03t0225900-01	Rice	mitochondrion, plastid	45.63	54.6
Zm00001d028282_P001	Maize	plastid	45.45	53.94
OQU92970	Sorghum	cytosol	44.76	53.0
VIT_18s0001g11630.t01	Wine grape	plastid	47.73	52.5
TraesCS4A01G061800.1	Wheat	plastid	44.06	52.5
TraesCS4D01G238700.1	Wheat	plastid	44.06	52.5
HORVU4Hr1G066230.1	Barley	plastid	44.06	52.5
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	44.23	52.49
TraesCS4B01G237500.1	Wheat	plastid	43.88	52.29
TraesCS4B01G237600.1	Wheat	cytosol, plastid	44.06	52.28
TraesCS4D01G238800.1	Wheat	cytosol, golgi	44.06	52.28
Solyc01g109140.2.1	Tomato	nucleus	43.53	52.09
HORVU4Hr1G066270.1	Barley	plasma membrane	44.23	51.95
PGSC0003DMT400064771	Potato	cytosol	43.36	51.88
Zm00001d048021_P001	Maize	plasma membrane	43.71	51.87
PGSC0003DMT400064773	Potato	cytosol	40.21	50.55
VIT_12s0059g01060.t01	Wine grape	plastid	31.29	36.76
GSMUA_Achr5P08810_001	Banana	cytosol	43.36	28.54

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100264033	wikigene:100264033	EntrezGene:100526774	wikigene:100526774	MapMan:11.7.1.3
ProteinID:ADP88811	ProteinID:ADP88811.1	ProteinID:CCB56941	ProteinID:CCB56941.1	ncoils:Coil	InterPro:Cyt_P450
InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	UniProt:F6HQI4	EMBL:FN596006	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016125	GO:GO:0016705	GO:GO:0016829	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
EMBL:HM627633	InterPro:IPR036396	EntrezGene:LOC100264033	wikigene:LOC100264033	EntrezGene:LOC100526774	wikigene:LOC100526774
PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF76	SUPFAM:SSF48264	UniParc:UPI0002109125
ArrayExpress:VIT_03s0063g01830	EnsemblPlantsGene:VIT_03s0063g01830	EnsemblPlants:VIT_03s0063g01830.t01	RefSeq:XP_002281201	RefSeq:XP_002281201.1	SEG:seg

Description

No Description!

Coordinates

chr3:-:5160926..5173965

Molecular Weight (calculated)

64625.5 Da

IEP (calculated)

8.651

GRAVY (calculated)

-0.299

Length

572 amino acids

Sequence
(BLAST)

001: MSSSSSSLPL NFVNSSSSSK LPLRSIPGDC GSPFFGPIKD RFDYFYNEGR DQFFRTRMQK YQSTVFRANM PPGPFMAFNP NVVVLLDAIS FPILFDTSRI
101: EKRNVLDGTY MPSTAFTGGY RVCAYLDPSE PNHALLKRFF TSSLAARHHN FIPVFRSCLT ELFTTLEDDV SRKGKADFNG ISDNMSFNFV FKLFCDKHPS
201: ETKLGSNGPN LVTKWLFLQL APLITLGLSM LPNVVEDLLL HTFPLPSLFV KSDYKKLYHA FYASASSLLD EAESMGIKRD EACHNLVFLA GFNAYGGMKT
301: LFPALIKWVG LAGGKLHRQL ADEIRSIVKA EGGVTFAALD KMALTKSVVY EALRIEPPVP FQYGKAKEDM VIHSHDAAFE IKKGEMIFGY QPFATKDPKV
401: FDNPEEFVAH RFMGDGEKLL EYVYWSNGRE SDDPTVENKQ CPGKDLVVLL SRVMLVEFFL HYDTFDIECG TLLLGSSVTF KSLTKQPTFD HNFFQLPAKL
501: GLRMEFPNPK TKRIPKSENS LGFGFINYKK NNHNKDEKQR RKKKEMREER GDAERAAVSP SGGEHQGRTC QF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.