Factsheet for GSMUA_Achr8P04830_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G238800.1	Wheat	cytosol, golgi	70.45	61.83
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	70.21	61.62
TraesCS4B01G237600.1	Wheat	cytosol, plastid	70.21	61.62
HORVU4Hr1G066270.1	Barley	plasma membrane	69.98	60.78
TraesCS4A01G061800.1	Wheat	plastid	68.56	60.42
TraesCS4B01G237500.1	Wheat	plastid	68.32	60.21
TraesCS4D01G238700.1	Wheat	plastid	68.32	60.21
VIT_03s0063g01840.t01	Wine grape	cytosol	31.68	59.82
HORVU4Hr1G066230.1	Barley	plastid	67.85	59.79
Zm00001d028282_P001	Maize	plastid	68.09	59.75
OQU92970	Sorghum	cytosol	68.09	59.63
Os03t0225900-01	Rice	mitochondrion, plastid	67.38	59.62
Zm00001d048021_P001	Maize	plasma membrane	67.85	59.54
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	58.39	50.72
VIT_03s0063g01850.t01	Wine grape	plastid	56.5	49.48
VIT_03s0063g01860.t01	Wine grape	plastid	56.5	49.48
GSMUA_Achr4P32370_001	Banana	plastid	55.32	47.18
GSMUA_Achr8P02880_001	Banana	plastid	56.5	46.95
Solyc01g109160.2.1	Tomato	cytosol	53.9	46.72
Solyc01g109150.2.1	Tomato	cytosol	54.37	46.56
KRH29541	Soybean	endoplasmic reticulum	51.54	45.61
Solyc10g007960.1.1	Tomato	cytosol	52.01	44.81
PGSC0003DMT400027377	Potato	cytosol	51.54	44.4
KRH49555	Soybean	endoplasmic reticulum	53.66	43.49
VIT_03s0063g01830.t01	Wine grape	plastid	58.39	43.18
Solyc01g109140.2.1	Tomato	nucleus	47.28	41.84
PGSC0003DMT400064771	Potato	cytosol	47.04	41.63
GSMUA_Achr6P13520_001	Banana	plastid	42.79	39.18
PGSC0003DMT400064773	Potato	cytosol	40.9	38.02
GSMUA_Achr5P08810_001	Banana	cytosol	62.41	30.38
GSMUA_Achr2P13300_001	Banana	cytosol	52.48	17.56

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G04830_001	EnsemblPlants:GSMUA_Achr8P04830_001
EnsemblPlants:GSMUA_Achr8T04830_001	InterPro:IPR036396	UniProt:M0TMN6	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF95	SUPFAM:SSF48264	UniParc:UPI000295F9ED	SEG:seg	:	:

Description

Allene oxide synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G04830_001]

Coordinates

chr8:+:3196270..3197841

Molecular Weight (calculated)

46943.5 Da

IEP (calculated)

8.259

GRAVY (calculated)

-0.058

Length

423 amino acids

Sequence
(BLAST)

001: MAESAATSTA TTLPVRDIPG DYGIPFASAI RDRLDFYYFQ GQDKFFQTRV DKYHSTVVRL NVPPGPFMAN DPRVIAVLDA NSFPILFDVS KVEKKDVFTG
101: TYMPSTSLTG GYRVCSYLDP SEPNHAKVKQ LLFNILASRK DAVIPAFRTN FTALFETMES QILEELLLHT FPLPPLIAKC DYKALYKYFS SVAGSALDSA
201: EKLGLKRDEA CHNLLFATVF NSYGGMKVLL PGILGWLAKA DKSLHVRLAK EIRSAVLFEG GKVTLNAVEK MDLTRSVVYE ALRMDPPVKY QYGKAKQDLV
301: IESHDAAFKV KKGEMLFGYQ PFATRDPKVF DDADRFIGDR FLGDEGKKLI KYVVWSNGPE TESPTVSNKQ CPGKDFVVLV GRLLVVEFFL RYDTFTADVG
401: TVLLGSQVTV TSLTKAAASS SDV

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.