Factsheet for Solyc10g007960.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027377	Potato	cytosol	94.3	94.3
VIT_03s0063g01840.t01	Wine grape	cytosol	27.9	61.16
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	59.47	59.96
Solyc01g109160.2.1	Tomato	cytosol	58.04	58.4
VIT_03s0063g01860.t01	Wine grape	plastid	56.82	57.76
VIT_03s0063g01850.t01	Wine grape	plastid	56.82	57.76
Solyc01g109150.2.1	Tomato	cytosol	57.64	57.29
GSMUA_Achr8P04830_001	Banana	cytosol	44.81	52.01
KRH29541	Soybean	endoplasmic reticulum	49.9	51.26
VIT_03s0063g01830.t01	Wine grape	plastid	58.45	50.17
Zm00001d048021_P001	Maize	plasma membrane	48.47	49.38
HORVU4Hr1G066270.1	Barley	plasma membrane	48.88	49.28
TraesCS4D01G238800.1	Wheat	cytosol, golgi	48.27	49.17
OQU92970	Sorghum	cytosol	48.07	48.86
TraesCS4B01G237600.1	Wheat	cytosol, plastid	47.86	48.76
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	47.66	48.55
Zm00001d028282_P001	Maize	plastid	47.45	48.34
Solyc01g109140.2.1	Tomato	nucleus	46.84	48.12
TraesCS4B01G237500.1	Wheat	plastid	46.84	47.92
TraesCS4D01G238700.1	Wheat	plastid	46.84	47.92
HORVU4Hr1G066230.1	Barley	plastid	46.84	47.92
Os03t0225900-01	Rice	mitochondrion, plastid	46.64	47.91
TraesCS4A01G061800.1	Wheat	plastid	46.64	47.71
KRH49555	Soybean	endoplasmic reticulum	49.9	46.93
Solyc11g069800.1.1	Tomato	plastid	48.68	46.86
Solyc04g079730.1.1	Tomato	plastid	49.9	45.88
Solyc07g049690.2.1	Tomato	plastid	34.01	35.08
GSMUA_Achr5P08810_001	Banana	cytosol	45.01	25.43

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	EMBL:AF454634	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0006631
GO:GO:0006633	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016125	GO:GO:0016705	GO:GO:0016829	GO:GO:0016853	GO:GO:0020037
GO:GO:0031408	GO:GO:0046423	GO:GO:0046872	GO:GO:0047987	GO:GO:0055114	InterPro:IPR036396
PFAM:PF00067	PANTHER:PTHR24286	PANTHER:PTHR24286:SF76	UniProt:Q8GZP5	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc10g007960.1
EnsemblPlants:Solyc10g007960.1.1	UniParc:UPI00000ADCD2	SEG:seg	:	:	:

Description

AOS3Allene oxide synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZP5]

Coordinates

chr10:-:2121096..2122571

Molecular Weight (calculated)

55517.0 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.167

Length

491 amino acids

Sequence
(BLAST)

001: MANTKDSYHI ITMDTKESSI PSLPMKEIPG DYGVPFFGAI KDRYDFHYNQ GADEFFRSRM KKYDSTVFRT NVPPGPFNAR NSKVVVLVDA VSYPILFDNS
101: QVDKENYFEG TFMSSPSFNG GYKVCGFLGT SDPKHTTLKG LFLSTLTRLH DKFIPIFTTS ITSMFTSLEK ELSEKGTSYF NPIGDNLSFE FLFRLFCEGK
201: NPIDTSVGPN GPKIVDKWVF LQLAPLISLG LKFVPNFLED LVLHTFPLPY ILVKRDHQKL YNAFYNSMKD ILDEAEKLGV KRDEACHNFV FLAGFNSYGG
301: LKVFFPSLIK WIGTSGPSLH ARLVKEIRTA VKEAGGVTLS AIDKMPLVKS VVYETLRMDP PVPFQTVKAR KNIIITNHES SFLIKKDELI FGYQPLATKD
401: SKVFKNAEEF NPDRFVGGGE KLLKYVYWSN GKEIDNPSVN DKQCPGKDLI VLMGRLLVVE FFMRYDTFEV EFGKLLLGSK VTFKSLTKAT S

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.