Factsheet for Solyc01g109150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g109160.2.1	Tomato	cytosol	79.35	80.33
PGSC0003DMT400064773	Potato	cytosol	70.45	76.48
VIT_03s0063g01840.t01	Wine grape	cytosol	29.15	64.29
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	61.34	62.22
VIT_03s0063g01850.t01	Wine grape	plastid	58.91	60.25
VIT_03s0063g01860.t01	Wine grape	plastid	58.7	60.04
Solyc10g007960.1.1	Tomato	cytosol	57.29	57.64
GSMUA_Achr8P04830_001	Banana	cytosol	46.56	54.37
Solyc01g109140.2.1	Tomato	nucleus	52.02	53.77
KRH29541	Soybean	endoplasmic reticulum	51.62	53.35
VIT_03s0063g01830.t01	Wine grape	plastid	60.93	52.62
KRH49555	Soybean	endoplasmic reticulum	52.02	49.23
Os03t0225900-01	Rice	mitochondrion, plastid	47.37	48.95
Solyc11g069800.1.1	Tomato	plastid	50.4	48.82
Zm00001d028282_P001	Maize	plastid	47.37	48.55
Zm00001d048021_P001	Maize	plasma membrane	47.37	48.55
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	47.17	48.34
OQU92970	Sorghum	cytosol	47.17	48.24
HORVU4Hr1G066270.1	Barley	plasma membrane	47.37	48.05
TraesCS4B01G237600.1	Wheat	cytosol, plastid	46.76	47.93
TraesCS4D01G238800.1	Wheat	cytosol, golgi	46.56	47.72
TraesCS4A01G061800.1	Wheat	plastid	45.95	47.29
HORVU4Hr1G066230.1	Barley	plastid	45.75	47.08
TraesCS4B01G237500.1	Wheat	plastid	45.55	46.88
TraesCS4D01G238700.1	Wheat	plastid	45.34	46.67
Solyc04g079730.1.1	Tomato	plastid	50.4	46.63
Solyc07g049690.2.1	Tomato	plastid	33.81	35.08
GSMUA_Achr5P08810_001	Banana	cytosol	45.55	25.89

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016125	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:K4B3C8	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF76
SUPFAM:SSF48264	EnsemblPlantsGene:Solyc01g109150.2	EnsemblPlants:Solyc01g109150.2.1	UniParc:UPI00027687FA	SEG:seg	:

Description

No Description!

Coordinates

chr1:+:96204268..96206343

Molecular Weight (calculated)

55839.4 Da

IEP (calculated)

6.927

GRAVY (calculated)

-0.107

Length

494 amino acids

Sequence
(BLAST)

001: MSSVSSKYPA IASSSDNESC KPLLQVREIP GDYGFPFFGA IKDRYDYYYS LGADEFFRTK SLKYNSTIFR TNMPPGPFIA KDPKVIVLLD AISFPILFDC
101: SKVEKKNVLD GTYMPSTDFF GGYRPCAFLD PSEPSHATHK GFYLSIISKL HTQFIPIFEN SVSLLFQNLE IQISKDGKAN FNDISDAMSF DFVFRLLCNN
201: TNPLDTKLGT TGPKCFDLWM LPQLAPLVTL GLKFVPNFLE DLMLHTFQLP FFIIKSKYQK LYDAFNEHAG STLDDAEKSG IKRDEACHNL VFLAGFNAYG
301: GMKILFPSLM KWVASGGKSL HTPLANEIRT IIKEEGGSIT LSAINKMSLV KSTVYEVLRI EPPIPFQYGK AKEDIMVQSH DSNFLIKKGE MIFGYQTFAT
401: KDAKIFENPE EFIAERFMGS EGEKLLKYVY WSNARETDSP TVDNKQCAGR DLAVLLCRLL LVEFFMRYDT FTVESSKYLA GPLITFKTLE KKAI

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.