Factsheet for TraesCS4B01G237600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G238800.1	Wheat	cytosol, golgi	98.76	98.76
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	97.93	97.93
HORVU4Hr1G066270.1	Barley	plasma membrane	94.61	93.63
TraesCS4B01G237500.1	Wheat	plastid	91.29	91.67
OQU92970	Sorghum	cytosol	81.33	81.16
Zm00001d048021_P001	Maize	plasma membrane	79.25	79.25
Zm00001d028282_P001	Maize	plastid	79.05	79.05
Os03t0225900-01	Rice	mitochondrion, plastid	78.22	78.87
GSMUA_Achr8P04830_001	Banana	cytosol	61.62	70.21
VIT_03s0063g01840.t01	Wine grape	cytosol	26.35	56.7
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	53.73	53.18
VIT_03s0063g01850.t01	Wine grape	plastid	52.7	52.59
VIT_03s0063g01860.t01	Wine grape	plastid	52.7	52.59
Solyc10g007960.1.1	Tomato	cytosol	48.76	47.86
KRH49555	Soybean	endoplasmic reticulum	51.24	47.32
TraesCS5B01G408000.1	Wheat	plastid	50.21	47.17
PGSC0003DMT400027377	Potato	cytosol	47.72	46.84
Solyc01g109150.2.1	Tomato	cytosol	47.93	46.76
KRH29541	Soybean	endoplasmic reticulum	45.85	46.23
Solyc01g109160.2.1	Tomato	cytosol	46.68	46.11
TraesCS6B01G213300.1	Wheat	plastid	49.38	45.68
VIT_03s0063g01830.t01	Wine grape	plastid	52.28	44.06
PGSC0003DMT400064771	Potato	cytosol	42.95	43.31
Solyc01g109140.2.1	Tomato	nucleus	42.74	43.1
TraesCS6B01G039500.1	Wheat	plastid	38.17	38.25
PGSC0003DMT400064773	Potato	cytosol	36.1	38.24
GSMUA_Achr5P08810_001	Banana	cytosol	59.13	32.8

Protein Annotations

EnsemblPlants:TraesCS4B01G237600.1	EnsemblPlantsGene:TraesCS4B01G237600	Gene3D:1.10.630.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114
InterPro:Cyt_P450	InterPro:Cyt_P450_sf	InterPro:IPR036396	PANTHER:PTHR24286	PANTHER:PTHR24286:SF95	PFAM:PF00067
SEG:seg	SUPFAM:SSF48264	MapMan:11.7.1.3	:	:	:

Description

No Description!

Coordinates

chr4B:-:495355182..495356630

Molecular Weight (calculated)

52808.6 Da

IEP (calculated)

7.968

GRAVY (calculated)

-0.005

Length

482 amino acids

Sequence
(BLAST)

001: MAGGDEGSLV PRQVPGSYGM PFVSAIRDRL DFYYFQGQDK YFESRVEKYG STVVRINVPP GPFMARDPRV VAVLDAKSFP VLFDVDKVEK KNLFTGTYMP
101: STSLTGGFRV CSYLDPSEPT HTKVKQLLFS LLASRKDAFI PAFRSHFSSL LATVESQIVL GGKSNFNTLN DATSFEFIGD AYFGVLPSAS DLGTTGPTKA
201: AKWLIFQLHP LVTLGLPMIL EEPLLHTVHL PPILVSGDYK ALYKYFFAAA TKALDTAEGL GLKRDEACHN LLFATVFNSY GGLKVLLPGI LARIAGAGEK
301: FHQKLVAEIR AAVADAGGKV TIEALEKMEL TKSAVWEALR LDPPVKFQYG RAKADMNIES HDAVFAVKKG EMLFGYQPCA TRDPRVFGST AREFVGDRFV
401: GEEGRKLLQY VYWSNGRETE SPSVDNKQCP GKNLVVLVGR LLVVELFLRY DTFTADVGVD LLGTKVEFTG VTKATSGPES AV

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.