Factsheet for VIT_03s0063g01850.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01860.t01	Wine grape	plastid	93.37	93.37
VIT_03s0063g01840.t01	Wine grape	cytosol	37.68	81.25
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	73.91	73.31
VIT_03s0063g01830.t01	Wine grape	plastid	75.57	63.81
KRH29541	Soybean	endoplasmic reticulum	59.63	60.25
Solyc01g109160.2.1	Tomato	cytosol	60.87	60.25
Solyc01g109150.2.1	Tomato	cytosol	60.25	58.91
Solyc10g007960.1.1	Tomato	cytosol	57.76	56.82
VIT_18s0001g11630.t01	Wine grape	plastid	60.87	56.54
GSMUA_Achr8P04830_001	Banana	cytosol	49.48	56.5
PGSC0003DMT400027377	Potato	cytosol	57.14	56.21
Zm00001d028282_P001	Maize	plastid	54.04	54.15
OQU92970	Sorghum	cytosol	54.04	54.04
KRH49555	Soybean	endoplasmic reticulum	58.39	54.02
Os03t0225900-01	Rice	mitochondrion, plastid	53.21	53.77
Zm00001d048021_P001	Maize	plasma membrane	53.0	53.11
HORVU4Hr1G066270.1	Barley	plasma membrane	53.42	52.98
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	52.59	52.7
TraesCS4B01G237600.1	Wheat	cytosol, plastid	52.59	52.7
TraesCS4D01G238800.1	Wheat	cytosol, golgi	52.59	52.7
TraesCS4D01G238700.1	Wheat	plastid	52.17	52.5
HORVU4Hr1G066230.1	Barley	plastid	52.17	52.5
TraesCS4B01G237500.1	Wheat	plastid	52.17	52.5
TraesCS4A01G061800.1	Wheat	plastid	52.17	52.5
PGSC0003DMT400064771	Potato	cytosol	51.14	51.67
Solyc01g109140.2.1	Tomato	nucleus	50.31	50.84
PGSC0003DMT400064773	Potato	cytosol	46.17	49.01
VIT_12s0059g01060.t01	Wine grape	plastid	38.51	38.19
GSMUA_Achr5P08810_001	Banana	cytosol	47.83	26.58

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100241751	wikigene:100241751	MapMan:11.7.1.3	ProteinID:CCB56943	ProteinID:CCB56943.1
InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	UniProt:F6HQI6	EMBL:FN596006	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016125	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	EntrezGene:LOC100241751	wikigene:LOC100241751	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF76	SUPFAM:SSF48264	UniParc:UPI00015C85B5	ArrayExpress:VIT_03s0063g01850	EnsemblPlantsGene:VIT_03s0063g01850	EnsemblPlants:VIT_03s0063g01850.t01
RefSeq:XP_002281190	RefSeq:XP_002281190.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:5183292..5184849

Molecular Weight (calculated)

54912.1 Da

IEP (calculated)

7.300

GRAVY (calculated)

-0.170

Length

483 amino acids

Sequence
(BLAST)

001: MSSSSSSSSS SRPELPLRKI PGDYGLPFFG PIRNRFDYFY NQGQDEFFKT RMQKYHSTVF RANMPPGPFI SSDSKVVVLL DTVSFPVLFD SSKVEKRNVF
101: VGTFMPSTDL TGGYRVLPYL DPSEPKHDLL KRFSFSLLAS RHRDFIPVFR SGLPDLFSTI EDDVSRKGKA NFNDIADDMY FNFVFRLICG KDPSDAKIRS
201: EGPNIFLKWL FLQLSPLLTL GLSILPNFID DLLLHTFPFP PFLVKSDYNK LYKAFYESAS SVLDEGERMG IKRDEACHNL VFLAGFNSFG GMKVFFPALI
301: KWVGLAGEKL HRELADEIRT VIKAEGGVTF AALDKMALTK SMVYEALRIE PPVPFQYGKA REDMVIHSHD AAFEIKKGEM IFGYQPFATK DPKVFENPEE
401: FVAHRFMGEG EKLLKYVYWS NGRETDNPTA ENKQCSGKDL VVLISRLMLV EIFLRYDTFE VESGTMLLGS SLLFKSLTKT SYT

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.