Factsheet for PGSC0003DMT400027377

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g007960.1.1	Tomato	cytosol	94.3	94.3
VIT_03s0063g01840.t01	Wine grape	cytosol	28.51	62.5
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	59.27	59.75
VIT_03s0063g01860.t01	Wine grape	plastid	56.21	57.14
VIT_03s0063g01850.t01	Wine grape	plastid	56.21	57.14
GSMUA_Achr8P04830_001	Banana	cytosol	44.4	51.54
KRH29541	Soybean	endoplasmic reticulum	49.08	50.42
VIT_03s0063g01830.t01	Wine grape	plastid	58.45	50.17
PGSC0003DMT400064771	Potato	cytosol	48.27	49.58
Zm00001d048021_P001	Maize	plasma membrane	48.07	48.96
PGSC0003DMT400064773	Potato	cytosol	45.21	48.79
HORVU4Hr1G066270.1	Barley	plasma membrane	48.27	48.67
PGSC0003DMT400002934	Potato	plastid	50.31	48.43
Zm00001d028282_P001	Maize	plastid	47.45	48.34
OQU92970	Sorghum	cytosol	47.25	48.03
TraesCS4D01G238800.1	Wheat	cytosol, golgi	47.05	47.93
TraesCS4B01G237600.1	Wheat	cytosol, plastid	46.84	47.72
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	46.64	47.51
Os03t0225900-01	Rice	mitochondrion, plastid	46.23	47.49
TraesCS4D01G238700.1	Wheat	plastid	46.23	47.29
TraesCS4B01G237500.1	Wheat	plastid	46.23	47.29
HORVU4Hr1G066230.1	Barley	plastid	46.23	47.29
KRH49555	Soybean	endoplasmic reticulum	50.1	47.13
TraesCS4A01G061800.1	Wheat	plastid	46.03	47.08
PGSC0003DMT400043495	Potato	plastid	49.49	45.85
PGSC0003DMT400002779	Potato	plastid	34.62	35.42
GSMUA_Achr5P08810_001	Banana	cytosol	45.01	25.43

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	ProteinID:AAU21293	ProteinID:AAU21293.1	ProteinID:ABA54984	ProteinID:ABA54984.1
EMBL:AJ868542	EMBL:AY615276	ProteinID:CAI30876	ProteinID:CAI30876.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	EMBL:DQ174273	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0016829	GO:GO:0020037
GO:GO:0046872	GO:GO:0047987	GO:GO:0055114	InterPro:IPR036396	UniProt:M1APL4	PFAM:PF00067
EnsemblPlantsGene:PGSC0003DMG400010557	PGSC:PGSC0003DMG400010557	EnsemblPlants:PGSC0003DMT400027377	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF76
SUPFAM:SSF48264	UniParc:UPI000294939C	SEG:seg	:	:	:

Description

Allene oxide syntase [Source:PGSC_GENE;Acc:PGSC0003DMG400010557]

Coordinates

chr10:-:3208673..3210364

Molecular Weight (calculated)

55616.0 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.185

Length

491 amino acids

Sequence
(BLAST)

001: MATTKDSYHI ITMDTKESSI PNLPMKEIPG DYGVPFLGAI KDRYDFHYNQ GADEFFRSRM EKHDSTIFRT NVPPGPFNAR NSKVVVLVDA VSYPILFDNS
101: QVDKENYFEG TFMSSPSFNG GYKVCGFLGT TDPKHTTLKG LFLSTLTRLH DKFIPIFTTS ITQTFTSIEK ELSEKGTSYF NPISDNLSFE FLFRLFCEGK
201: NPVETSVGTN GPKIVDKWVF LQLAPLISLG LKYVPNFLED LVLHTFPLPY FLVKGDHQKL YNAFYNSMKD ILDEAEKLGV KRDEACHNFI FLAGFNSYGG
301: MKVFFPSLIK WIGTSGPSLH TRLVKEIRTA VKEAGGVTLS AIDKMPLVKS VVYETLRMDP PVPFQTVKAR KNIIVSNHEA SFLIKKDELI FGYQPLATKD
401: SKVFKNGEEF NPDRFVGYGE KLLKYVYWSN GKEIDNPTVN DKQCPGKDLI VLLGRLLVVE FFMRYDTFEI EFGKLLLGSK VTFKSLTKAT S

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.