Factsheet for VIT_03s0063g01840.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	82.59	37.99
VIT_03s0063g01850.t01	Wine grape	plastid	81.25	37.68
VIT_03s0063g01830.t01	Wine grape	plastid	94.2	36.89
VIT_03s0063g01860.t01	Wine grape	plastid	79.46	36.85
GSMUA_Achr8P04830_001	Banana	cytosol	59.82	31.68
Solyc01g109160.2.1	Tomato	cytosol	66.52	30.53
KRH29541	Soybean	endoplasmic reticulum	64.73	30.33
Solyc01g109150.2.1	Tomato	cytosol	64.29	29.15
PGSC0003DMT400027377	Potato	cytosol	62.5	28.51
Solyc10g007960.1.1	Tomato	cytosol	61.16	27.9
Os03t0225900-01	Rice	mitochondrion, plastid	57.14	26.78
Zm00001d028282_P001	Maize	plastid	57.59	26.76
OQU92970	Sorghum	cytosol	57.59	26.71
TraesCS4D01G238700.1	Wheat	plastid	56.7	26.46
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	56.7	26.35
TraesCS4B01G237600.1	Wheat	cytosol, plastid	56.7	26.35
TraesCS4D01G238800.1	Wheat	cytosol, golgi	56.7	26.35
HORVU4Hr1G066230.1	Barley	plastid	56.25	26.25
TraesCS4A01G061800.1	Wheat	plastid	56.25	26.25
TraesCS4B01G237500.1	Wheat	plastid	56.25	26.25
HORVU4Hr1G066270.1	Barley	plasma membrane	56.7	26.08
Zm00001d048021_P001	Maize	plasma membrane	55.8	25.93
KRH49555	Soybean	endoplasmic reticulum	59.82	25.67
VIT_18s0001g11630.t01	Wine grape	plastid	58.93	25.38
PGSC0003DMT400064771	Potato	cytosol	53.57	25.1
Solyc01g109140.2.1	Tomato	nucleus	53.12	24.9
VIT_12s0059g01060.t01	Wine grape	plastid	36.61	16.84
PGSC0003DMT400064773	Potato	cytosol	33.93	16.7
GSMUA_Achr5P08810_001	Banana	cytosol	56.25	14.5

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	ProteinID:CCB56942	ProteinID:CCB56942.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	UniProt:F6HQI5	EMBL:FN596006	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016125
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF76	SUPFAM:SSF48264	UniParc:UPI0002109126	ArrayExpress:VIT_03s0063g01840
EnsemblPlantsGene:VIT_03s0063g01840	EnsemblPlants:VIT_03s0063g01840.t01	:	:	:	:

Description

No Description!

Coordinates

chr3:-:5174535..5175209

Molecular Weight (calculated)

25155.4 Da

IEP (calculated)

6.399

GRAVY (calculated)

-0.139

Length

224 amino acids

Sequence
(BLAST)

001: MGIKRDEACH NLVFLAGFNA YGGMKTLFPA LIKWVGLAGE KLHGQLADEI RSIVKAEGGV TFAALDKMAL TKSVVYEALR IEPPVPFQYG KAKEDMVIHS
101: HDAAFEIKKG EMIFGYQPFA TKDPKVFDNP EEFVAHRFMG DGEKMLEYVY WSNGRESDDP TVENKQCPGK DLVVLLSRVM MVEFFLRYDT FNIECGTLLL
201: GSSVTFKSLT KQPTFDHKSI THVS

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.