Factsheet for Solyc01g109160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g109150.2.1	Tomato	cytosol	80.33	79.35
PGSC0003DMT400064773	Potato	cytosol	62.09	66.59
VIT_03s0063g01840.t01	Wine grape	cytosol	30.53	66.52
VIT_03s0063g01820.t01	Wine grape	cytosol, nucleus, plastid	62.91	63.04
VIT_03s0063g01860.t01	Wine grape	plastid	60.25	60.87
VIT_03s0063g01850.t01	Wine grape	plastid	60.25	60.87
Solyc10g007960.1.1	Tomato	cytosol	58.4	58.04
KRH29541	Soybean	endoplasmic reticulum	53.69	54.81
GSMUA_Achr8P04830_001	Banana	cytosol	46.72	53.9
VIT_03s0063g01830.t01	Wine grape	plastid	61.89	52.8
Solyc01g109140.2.1	Tomato	nucleus	50.82	51.88
KRH49555	Soybean	endoplasmic reticulum	52.25	48.85
OQU92970	Sorghum	cytosol	47.54	48.03
Zm00001d028282_P001	Maize	plastid	47.34	47.93
Zm00001d048021_P001	Maize	plasma membrane	47.13	47.72
Solyc11g069800.1.1	Tomato	plastid	49.59	47.45
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	46.31	46.89
TraesCS4B01G237600.1	Wheat	cytosol, plastid	46.11	46.68
Os03t0225900-01	Rice	mitochondrion, plastid	45.7	46.65
TraesCS4D01G238800.1	Wheat	cytosol, golgi	45.9	46.47
TraesCS4A01G061800.1	Wheat	plastid	45.49	46.25
HORVU4Hr1G066230.1	Barley	plastid	45.49	46.25
HORVU4Hr1G066270.1	Barley	plasma membrane	46.11	46.2
TraesCS4B01G237500.1	Wheat	plastid	45.29	46.04
TraesCS4D01G238700.1	Wheat	plastid	45.08	45.83
Solyc04g079730.1.1	Tomato	plastid	50.0	45.69
Solyc07g049690.2.1	Tomato	plastid	35.25	36.13
GSMUA_Achr5P08810_001	Banana	cytosol	44.26	24.86

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016125	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396
UniProt:K4B3C9	PFAM:PF00067	PANTHER:PTHR24286	PANTHER:PTHR24286:SF76	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc01g109160.2
EnsemblPlants:Solyc01g109160.2.1	UniParc:UPI00027687FB	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:96212065..96214359

Molecular Weight (calculated)

55375.6 Da

IEP (calculated)

8.977

GRAVY (calculated)

-0.203

Length

488 amino acids

Sequence
(BLAST)

001: MSSFCSKSPA ISNCSNDEYS NSSLPVGEIP GDYGFPFFGA IKDRYDYFYN LGTDEFFRTK SRKYNSTVFK TNMPPGPFIA KNPKVIALLD SKTFPILFDN
101: SKVEKKNVLD GTYMPSTNFF GGYRPCAFLD PSEPKHARLK GFYLSIISKY HTQSIPIFET SVSALFQNLE IQISKNGKAN FNDISDAMSF DFVFRLLCDK
201: TTRNVGPKYF DKWMLPQLVP LVTLGLKFVP NFMEDLILHT FPLPFCLVKS NYQKLYDAFS EHAGSILSEI EKSGIKRDEA CHNLVFLSGF NAYGGMKVVF
301: PSLIKWVASA GKSLHTRLAN EIRTIIKGEG GSITLSSVNK MSLVKSTVYE VLRIEPPLPF QYGKAKQDIM VQSHDSNFLI KKGEMIFGYQ TFATKDAKIF
401: ENPEEFIAER FMGSEGEKLL KYVYWSNARE TDDPTVDNKQ SPAKDLVVLL CRLLVVEFFM RYDKFTVESN KFLFGSSVTF KTLDKKTT

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.