Factsheet for Solyc04g079730.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g047770.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	Solyc07g047770.2.1	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043495	Potato	plastid	89.33	90.0
KRH15274	Soybean	cytosol	56.37	72.01
VIT_18s0001g11630.t01	Wine grape	plastid	67.42	69.23
Solyc11g069800.1.1	Tomato	plastid	65.17	68.24
KRH05758	Soybean	nucleus, plastid	64.98	66.86
KRH61218	Soybean	nucleus, plastid	63.86	65.45
AT5G42650.1	Thale cress	plastid	61.42	63.32
GSMUA_Achr4P32370_001	Banana	plastid	57.87	62.3
CDY02409	Canola	plastid	60.67	61.25
CDY23912	Canola	plastid	60.67	61.25
Bra035320.1-P	Field mustard	plastid	60.3	60.87
Os03t0767000-01	Rice	plastid	56.93	59.38
GSMUA_Achr8P02880_001	Banana	plastid	56.55	59.33
EER90827	Sorghum	plastid	55.81	58.2
Zm00001d034186_P001	Maize	plastid	55.81	57.42
Zm00001d034184_P001	Maize	plasma membrane, plastid	55.43	57.36
Zm00001d013185_P001	Maize	plastid	54.87	57.34
TraesCS5D01G413200.1	Wheat	plastid	54.31	57.09
TraesCS5A01G403200.1	Wheat	plastid	54.31	57.09
HORVU5Hr1G098090.1	Barley	plastid	53.93	56.69
TraesCS5B01G408000.1	Wheat	plastid	54.12	56.34
Solyc01g109150.2.1	Tomato	cytosol	46.63	50.4
Solyc01g109160.2.1	Tomato	cytosol	45.69	50.0
Solyc10g007960.1.1	Tomato	cytosol	45.88	49.9
Solyc01g109140.2.1	Tomato	nucleus	41.57	46.44
TraesCS6D01G172200.1	Wheat	cytosol, plastid	41.39	45.01
Os02t0218700-01	Rice	extracellular, plasma membrane	42.13	45.0
HORVU6Hr1G039440.1	Barley	plasma membrane	40.82	44.4
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	42.13	44.12
Zm00001d053586_P001	Maize	cytosol	41.01	43.03
EES04752	Sorghum	cytosol	42.13	42.86
TraesCS6B01G213300.1	Wheat	plastid	41.2	42.23
TraesCS6A01G185100.1	Wheat	mitochondrion, plastid	41.57	41.97
KRH38153	Soybean	plastid	9.93	41.41
Solyc07g049690.2.1	Tomato	plastid	35.39	39.71
GSMUA_Achr2P13300_001	Banana	cytosol	53.75	22.71

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	EMBL:AJ271093	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009695	GO:GO:0009941	GO:GO:0009987
GO:GO:0016020	GO:GO:0016125	GO:GO:0016705	GO:GO:0016829	GO:GO:0020037	GO:GO:0031408
GO:GO:0046872	GO:GO:0047987	GO:GO:0055114	InterPro:IPR036396	UniProt:K4BV52	PFAM:PF00067
PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF50	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc04g079730.1	EnsemblPlants:Solyc04g079730.1.1
UniParc:UPI00027673A3	SEG:seg	:	:	:	:

Description

AOS1Allene oxide synthase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:K4BV52]

Coordinates

chr4:-:64093804..64095408

Molecular Weight (calculated)

59779.7 Da

IEP (calculated)

9.019

GRAVY (calculated)

-0.244

Length

534 amino acids

Sequence
(BLAST)

001: MASTSLSLPS LKLQFPSHTS SSSRKNSSSY RVSIRPIQAS VSEIPPYISS PSQSPSSSSS PPVKQAKLPA QKVPGDYGLP LVGPWKDRLD YFYNQGKNEF
101: FKSRIQKHQS TVFRTNMPPG PFISFNPNVV VLLDGKSFPV LFDVSKVEKK DLFTGTFMPS TDLTGGYRVL SYLDPSEPNH AKLKKLMFYL LSSRRNEVIP
201: EFHNSYSELF ETLENELSTK GKAGLNAAND QAAFNFLARS LYGINPQDTE LGTDGPKLIG KWVLFQLHPL LILGLPKVLE DLVMHTFRLP PALVKKDYQR
301: LYNFFYENST SVLDEAEKIG ISREEACHNL LFATCFNSFG GIKIFFPNML KWIGRAGAKL HSQLAQEIRS VISSNSGKVT MAAMEKMPLM KSVVYESLRI
401: EPPVASQYGR AKHDMVIESH DASFEIKEGE LLYGYQPFAT KDPKIFDRSE EFVADRFIGE EGEKLLKHVL WSNGSETENA SINNKQCAGK DFVVLVSRLL
501: LVELFLRYDS FEIEVGASPL GAAITLTSLR RASF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.