Factsheet for TraesCS5D01G413200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G403200.1	Wheat	plastid	94.69	94.69
TraesCS5B01G408000.1	Wheat	plastid	94.69	93.76
HORVU5Hr1G098090.1	Barley	plastid	91.73	91.73
Os03t0767000-01	Rice	plastid	83.46	82.81
EER90827	Sorghum	plastid	82.28	81.64
Zm00001d013185_P001	Maize	plastid	82.09	81.6
Zm00001d034184_P001	Maize	plasma membrane, plastid	81.89	80.62
Zm00001d034186_P001	Maize	plastid	81.5	79.77
GSMUA_Achr4P32370_001	Banana	plastid	62.01	63.51
KRH15274	Soybean	cytosol	51.57	62.68
GSMUA_Achr8P02880_001	Banana	plastid	61.22	61.1
KRH05758	Soybean	nucleus, plastid	58.27	57.03
KRH61218	Soybean	nucleus, plastid	57.68	56.24
PGSC0003DMT400043495	Potato	plastid	56.89	54.53
Solyc04g079730.1.1	Tomato	plastid	57.09	54.31
PGSC0003DMT400002934	Potato	plastid	54.33	54.12
VIT_18s0001g11630.t01	Wine grape	plastid	54.92	53.65
CDY23912	Canola	plastid	55.12	52.93
CDY02409	Canola	plastid	55.12	52.93
Bra035320.1-P	Field mustard	plastid	54.72	52.55
AT5G42650.1	Thale cress	plastid	53.54	52.51
Solyc11g069800.1.1	Tomato	plastid	52.17	51.96
TraesCS4D01G238700.1	Wheat	plastid	47.64	50.42
TraesCS4D01G238800.1	Wheat	cytosol, golgi	47.64	50.21
TraesCS6D01G172200.1	Wheat	cytosol, plastid	45.08	46.64
TraesCS6D01G031100.2	Wheat	plastid	39.17	41.37
KRH38153	Soybean	plastid	7.48	29.69
GSMUA_Achr2P13300_001	Banana	cytosol	56.89	22.86

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00465
PANTHER:PTHR24286	PANTHER:PTHR24286:SF50	SUPFAM:SSF48264	EnsemblPlantsGene:TraesCS5D01G413200	EnsemblPlants:TraesCS5D01G413200.1	SEG:seg

Description

No Description!

Coordinates

chr5D:-:476157369..476158895

Molecular Weight (calculated)

56138.9 Da

IEP (calculated)

9.420

GRAVY (calculated)

-0.105

Length

508 amino acids

Sequence
(BLAST)

001: MATAIHQLSF AAPSAGARRR LTRASASATD RHEVLSPKRR LPLRKVPGEH GPPLLGALKD RLEYFYGPGG RDGFFAARVR AHRSTVVRLN MPPGPFVAKD
101: PRVVALLDAA SFPVLFDTSL VDKTDLFTGT FMPSTDLTGG YRVLSYVDPA EPNHAPLKSL LFHLLTHRRQ HVIPTFREVY GGLFGRMEND LARVGKADFG
201: NYNDDAAFGF LCQALLGRDP VDSPLREEGP KLIAKWLLFQ ISPLLSLGLP TLVEDGLLHS FRLPPALIKK DYGRLADFFR DAGKAVIDEG ERLGIAREEA
301: VHNILFAMCF NSFGGIKILF PSLVKWLGRA GGRVHGRLAT EVRAAVRANG GEVTMQALAE MPLVKSAVYE ALRIEPPVAM QYGRAKRDMV VESHDYGYEV
401: REGELLFGYQ PMATKDPRVF PRAEDYVPDR FLGEDGERLL RYVVWSNGPE SATPTLQDKQ CAGKDFVVLI ARLLVAELFL RYDSFDVQVG SSPLGSSVTI
501: TSLKKATF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.