CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013185_P001	Maize	plastid	93.36	93.54
Zm00001d034184_P001	Maize	plasma membrane, plastid	90.23	89.53
Zm00001d034186_P001	Maize	plastid	90.04	88.82
Os03t0767000-01	Rice	plastid	86.72	86.72
TraesCS5D01G413200.1	Wheat	plastid	81.64	82.28
HORVU5Hr1G098090.1	Barley	plastid	81.45	82.09
TraesCS5B01G408000.1	Wheat	plastid	82.23	82.07
TraesCS5A01G403200.1	Wheat	plastid	81.05	81.69
GSMUA_Achr4P32370_001	Banana	plastid	64.65	66.73
KRH15274	Soybean	cytosol	53.52	65.55
GSMUA_Achr8P02880_001	Banana	plastid	63.87	64.24
KRH61218	Soybean	nucleus, plastid	60.74	59.69
KRH05758	Soybean	nucleus, plastid	59.38	58.57
PGSC0003DMT400002934	Potato	plastid	58.01	58.24
PGSC0003DMT400043495	Potato	plastid	58.79	56.79
VIT_18s0001g11630.t01	Wine grape	plastid	57.23	56.35
Solyc04g079730.1.1	Tomato	plastid	58.2	55.81
Solyc11g069800.1.1	Tomato	plastid	55.08	55.29
CDY02409	Canola	plastid	57.03	55.2
AT5G42650.1	Thale cress	plastid	55.66	55.02
Bra035320.1-P	Field mustard	plastid	56.64	54.82
CDY23912	Canola	plastid	56.64	54.82
OQU92970	Sorghum	cytosol	50.2	53.21
EES04752	Sorghum	cytosol	44.14	43.05
OQU84187	Sorghum	plastid	38.67	39.36
KRH38153	Soybean	plastid	8.4	33.59
GSMUA_Achr2P13300_001	Banana	cytosol	59.18	23.97

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	EntrezGene:8086184	UniProt:C5WZ95	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	EnsemblPlants:EER90827	ProteinID:EER90827	ProteinID:EER90827.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009620	GO:GO:0009695	GO:GO:0009719
GO:GO:0009753	GO:GO:0009941	GO:GO:0009978	GO:GO:0009987	GO:GO:0010287	GO:GO:0016020
GO:GO:0016125	GO:GO:0016705	GO:GO:0020037	GO:GO:0031407	GO:GO:0046872	GO:GO:0050832
GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF50
EnsemblPlantsGene:SORBI_3001G077400	SUPFAM:SSF48264	unigene:Sbi.9589	UniParc:UPI0001A822E1	RefSeq:XP_002463829.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:5940863..5942670

Molecular Weight (calculated)

56863.5 Da

IEP (calculated)

9.515

GRAVY (calculated)

-0.150

Length

512 amino acids

Sequence
(BLAST)

001: MATATYLSSF PAAPSSRTRL RRQTTRATAS ATDRPREVVS PKRRLPLRKV PGDYGLPVLG AIRDRFEYFY GPGGRDGFFT SRVRAHGSTV VRLNMPPGPF
101: VARDPRVVAL LDAASFPVLF DTSLVDKTDL FTGTFMPSTD LTGGYRVLSY LDPSEPNHGP LKTLLFYLLS HRRQHVIPKF REVYGDLFGH MENELARVGK
201: ADFGHYNDAA AFSFLCQALL GRDPAESALQ GDGPKLITKW VLFQLSPLLS LGLPKHVEDS LLHSFRLPPA LVKKDYDRLA DFFRDAGRSV VDEGERLGIA
301: REEAVHNILF AMCFNSFGGM KILFPSLVKW LGRAGARTHG RLATEVRDAV RAHGGEVTMK ALAEMPLVKS AVYEALRIEP PVAMQYGRAK RDMVVESHDY
401: GFEVREGEML FGYQPMATKD PRVFARAEEY VPDRFLGEDG AQLLRHVVWS NGPETVSPTL QDKQCAGKDF VVLIARLLVA ELFLRYDSFD VQVGASALGS
501: SVTITSLKKA TF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.