Factsheet for Zm00001d034184_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014297_P006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	Zm00001d014297_P006	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034186_P001	Maize	plastid	93.41	92.87
EER90827	Sorghum	plastid	89.53	90.23
Zm00001d013185_P001	Maize	plastid	89.34	90.22
Os03t0767000-01	Rice	plastid	84.11	84.77
TraesCS5D01G413200.1	Wheat	plastid	80.62	81.89
HORVU5Hr1G098090.1	Barley	plastid	80.04	81.3
TraesCS5B01G408000.1	Wheat	plastid	80.81	81.29
TraesCS5A01G403200.1	Wheat	plastid	79.84	81.1
GSMUA_Achr4P32370_001	Banana	plastid	63.57	66.13
KRH15274	Soybean	cytosol	52.52	64.83
GSMUA_Achr8P02880_001	Banana	plastid	63.57	64.44
KRH61218	Soybean	nucleus, plastid	58.14	57.58
KRH05758	Soybean	nucleus, plastid	57.75	57.42
PGSC0003DMT400002934	Potato	plastid	56.59	57.25
PGSC0003DMT400043495	Potato	plastid	57.56	56.04
Solyc04g079730.1.1	Tomato	plastid	57.36	55.43
VIT_18s0001g11630.t01	Wine grape	plastid	55.62	55.19
Solyc11g069800.1.1	Tomato	plastid	54.26	54.9
AT5G42650.1	Thale cress	plastid	54.65	54.44
Zm00001d048021_P001	Maize	plasma membrane	50.39	53.94
Zm00001d028282_P001	Maize	plastid	50.0	53.53
CDY02409	Canola	plastid	54.65	53.31
Bra035320.1-P	Field mustard	plastid	54.26	52.93
CDY23912	Canola	plastid	54.26	52.93
Zm00001d053586_P001	Maize	cytosol	43.8	44.4
Zm00001d054067_P001	Maize	plasma membrane	38.95	40.04
KRH38153	Soybean	plastid	7.75	31.25
GSMUA_Achr2P13300_001	Banana	cytosol	57.56	23.5

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:103644067	MapMan:11.7.1.3	UniProt:B6TT18	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	EMBL:EU968133	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	ProteinID:ONM09763.1	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF50	SUPFAM:SSF48264	UniParc:UPI000182E22D	EnsemblPlantsGene:Zm00001d034184	EnsemblPlants:Zm00001d034184_P001	EnsemblPlants:Zm00001d034184_T001
SEG:seg	:	:	:	:	:

Description

allene oxide synthesis4 allene oxide synthesis4

Coordinates

chr1:-:285946538..285948088

Molecular Weight (calculated)

56939.5 Da

IEP (calculated)

9.127

GRAVY (calculated)

-0.128

Length

516 amino acids

Sequence
(BLAST)

001: MATATYLSSS FSSPPPPSSR ARLRRQTTRA GASAATDRPR EVLSPKRRLP LREVPGDYGP PVLGAVRDRF EYFYGPGGRD GFFASRVRAH GSTVVRLNMP
101: PGPFVARDPR VVALLDAASF PVLFDTSLVD KTDLFTGTFM PSTDLTGGYR MLSYIDPAEP SHGPLKALLF YLLSHRRQHV IPKFREVYGD LFGVVENELA
201: RVGKADFGHH NDAAAFSFLC QALLGRDPAE SALHGDGPKL ITKWVLFQLS PLLSLGLPKH LEDSLLHSFR LPPALVRKDY GRLADFFRDA ARTVVDEGER
301: LGIAREEAVH NILFATCFNS FGGMKILFPS LVKWLGRAGA RAHGRLATEV RDAVRAHAGE VTMKALAEMP LVESAVYEAL RIEPPVAMQY GRAKRDMVVE
401: SHDYGFEVRE GEMLFGYQPM ATKDPRVFAR AEEYVPDRFL GEDGAQLLRH VVWSNGPETA SPTLQDKQCA GKDFVVLIAR LLVAELFLRY DSFDVQVGAS
501: ALGSSVTITS LKKATF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.