Factsheet for GSMUA_Achr8P02880_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22740_001
GSMUA_Achr4P17470_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	GSMUA_Achr1P22740_001	AT5G35750.1	18642946
AT5G42650.1	GSMUA_Achr4P17470_001	AT5G35750.1	18642946
AT5G42650.1	GSMUA_AchrUn_...	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P32370_001	Banana	plastid	69.55	71.37
KRH15274	Soybean	cytosol	53.63	65.31
Zm00001d013185_P001	Maize	plastid	64.64	64.38
EER90827	Sorghum	plastid	64.24	63.87
Zm00001d034184_P001	Maize	plasma membrane, plastid	64.44	63.57
Os03t0767000-01	Rice	plastid	63.46	63.09
Zm00001d034186_P001	Maize	plastid	64.24	63.01
HORVU5Hr1G098090.1	Barley	plastid	61.49	61.61
TraesCS5A01G403200.1	Wheat	plastid	61.3	61.42
TraesCS5D01G413200.1	Wheat	plastid	61.1	61.22
TraesCS5B01G408000.1	Wheat	plastid	61.49	61.01
KRH05758	Soybean	nucleus, plastid	60.71	59.54
KRH61218	Soybean	nucleus, plastid	59.53	58.16
AT5G42650.1	Thale cress	plastid	58.15	57.14
PGSC0003DMT400043495	Potato	plastid	59.33	56.98
Solyc04g079730.1.1	Tomato	plastid	59.33	56.55
GSMUA_Achr8P04830_001	Banana	cytosol	46.95	56.5
VIT_18s0001g11630.t01	Wine grape	plastid	57.56	56.35
CDY02409	Canola	plastid	58.15	55.95
Bra035320.1-P	Field mustard	plastid	57.76	55.58
CDY23912	Canola	plastid	57.76	55.58
PGSC0003DMT400002934	Potato	plastid	55.01	54.9
Solyc11g069800.1.1	Tomato	plastid	54.22	54.12
GSMUA_Achr6P13520_001	Banana	plastid	39.1	43.07
KRH38153	Soybean	plastid	8.84	35.16
GSMUA_Achr2P13300_001	Banana	cytosol	66.4	26.74
GSMUA_Achr5P08810_001	Banana	cytosol	44.79	26.24

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G02880_001	EnsemblPlants:GSMUA_Achr8P02880_001
EnsemblPlants:GSMUA_Achr8T02880_001	InterPro:IPR036396	UniProt:M0TM40	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF50	SUPFAM:SSF48264	UniParc:UPI000296B19D	SEG:seg	:	:

Description

Allene oxide synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G02880_001]

Coordinates

chr8:-:1980282..1981811

Molecular Weight (calculated)

56378.9 Da

IEP (calculated)

9.431

GRAVY (calculated)

-0.014

Length

509 amino acids

Sequence
(BLAST)

001: MASSASLILS SGTPISPSRS RSGAHRRPAS IGVSSSASAD LPLRKIPGDY GLPFLGPLCD RLAYFYFEGR DQFFRSRIRR YGSTVFRVNV PPGPFVAPDP
101: RVVALLDAAS FPVLFDTSLV EKRDLFTGTF MPSTELTGGF RVLPYLDPAE PNHAQLKRLL FFLLGSRRHA VVPEFRRSFG FLFEAMEAEI AREGKADFSA
201: ANDRAAFDFL VRCFFGTDPA GSRLDLDGPG LINKWVLFQL GPLLKLGLPP YLEDFLLHSF RLPPALVRAD YDRLTDFFRE SAGPFLDEAK RFGVSREEAL
301: HNVMFATCFN AFSGMKVLFP SLIKWIGRAG ARLHGRIAEE VRSAVRGTGN GEVTVRAVEA AMPLTRSVVY EALRVEPPMP LQYGRAKRDM VVASHDGRFE
401: VRAGEVLFGY QPFATRDPRV FERAEEFVAA RFVGAEGAAL LRHVLWSNGP ETEGPTTENK QCAGKDFVVT VARLLVVELF LRYDSFEIEV GASPLGSLVK
501: LTSLKRATF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.