CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH14106
KRH74010

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	KRH14106	AT5G35750.1	18642946
AT5G42650.1	KRH74010	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05758	Soybean	nucleus, plastid	42.97	10.6
PGSC0003DMT400043495	Potato	plastid	41.41	10.0
Solyc04g079730.1.1	Tomato	plastid	41.41	9.93
KRH61218	Soybean	nucleus, plastid	38.28	9.4
VIT_18s0001g11630.t01	Wine grape	plastid	37.5	9.23
KRH29541	Soybean	endoplasmic reticulum	34.38	9.21
GSMUA_Achr4P32370_001	Banana	plastid	35.16	9.07
GSMUA_Achr8P02880_001	Banana	plastid	35.16	8.84
Solyc11g069800.1.1	Tomato	plastid	35.16	8.82
PGSC0003DMT400002934	Potato	plastid	35.16	8.82
KRH49555	Soybean	endoplasmic reticulum	35.16	8.62
EER90827	Sorghum	plastid	33.59	8.4
Bra035320.1-P	Field mustard	plastid	34.38	8.32
CDY02409	Canola	plastid	34.38	8.32
KRH15274	Soybean	cytosol	26.56	8.13
CDY23912	Canola	plastid	33.59	8.13
Zm00001d013185_P001	Maize	plastid	31.25	7.83
Os03t0767000-01	Rice	plastid	31.25	7.81
Zm00001d034184_P001	Maize	plasma membrane, plastid	31.25	7.75
AT5G42650.1	Thale cress	plastid	31.25	7.72
TraesCS5B01G408000.1	Wheat	plastid	30.47	7.6
HORVU5Hr1G098090.1	Barley	plastid	29.69	7.48
TraesCS5D01G413200.1	Wheat	plastid	29.69	7.48
Zm00001d034186_P001	Maize	plastid	29.69	7.32
TraesCS5A01G403200.1	Wheat	plastid	28.91	7.28
KRH26745	Soybean	plastid	26.56	7.17
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	28.12	7.06
HORVU6Hr1G039440.1	Barley	plasma membrane	24.22	6.31
Os02t0218700-01	Rice	extracellular, plasma membrane	24.22	6.2
TraesCS6B01G213300.1	Wheat	plastid	25.0	6.14
TraesCS6D01G172200.1	Wheat	cytosol, plastid	23.44	6.11
EES04752	Sorghum	cytosol	25.0	6.1
TraesCS6A01G185100.1	Wheat	mitochondrion, plastid	25.0	6.05
Zm00001d053586_P001	Maize	cytosol	21.88	5.5
GSMUA_Achr2P13300_001	Banana	cytosol	32.81	3.32

Protein Annotations

EMBL:ACUP02005674	EnsemblPlants:KRH38153	EnsemblPlantsGene:GLYMA_09G114800	Gene3D:1.10.630.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037
GO:GO:0055114	InterPro:Cyt_P450_sf	InterPro:IPR036396	PANTHER:PTHR24286	PANTHER:PTHR24286:SF156	ProteinID:KRH38153
ProteinID:KRH38153.1	UniParc:UPI0006ED8FD0	UniProt:A0A0R0ID53	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr9:-:24747954..24748376

Molecular Weight (calculated)

14027.1 Da

IEP (calculated)

9.490

GRAVY (calculated)

-0.082

Length

128 amino acids

Sequence
(BLAST)

001: MASSASTTLS SPFLRLELPS TTIKPCSSII SVPSIRASVS EKPPLPAVSV TSLEPNPQNS RRLRLPGRDE FCKSCIQKYQ STVFRTNMPP GPFLAPNPNV
101: IVLLDVKTFP ILFDNSKIDK KDVFTCTC

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.