CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g01060.t01	Wine grape	plastid	65.61	63.86
Solyc07g049690.2.1	Tomato	plastid	62.24	61.97
PGSC0003DMT400002779	Potato	plastid	62.24	61.46
Bra012788.1-P	Field mustard	plastid	62.66	60.74
CDX90591	Canola	plastid	62.66	60.74
CDY09763	Canola	cytosol, plastid	48.95	60.42
AT4G15440.1	Thale cress	cytosol	48.95	60.42
GSMUA_Achr6P13520_001	Banana	plastid	51.9	53.25
TraesCS6D01G031100.2	Wheat	plastid	50.21	49.48
Os02t0110200-01	Rice	plastid	50.63	49.28
TraesCS6A01G027900.1	Wheat	plastid	49.79	48.76
TraesCS6B01G039500.1	Wheat	plastid	48.95	48.23
OQU84187	Sorghum	plastid	48.95	46.12
Zm00001d054067_P001	Maize	plasma membrane	48.31	45.62
HORVU6Hr1G005250.1	Barley	plastid	50.21	43.51
KRH15274	Soybean	cytosol	33.97	38.52
KRH61218	Soybean	nucleus, plastid	40.93	37.24
KRH05758	Soybean	nucleus, plastid	40.08	36.61
KRH29541	Soybean	endoplasmic reticulum	36.08	35.77
KRH49555	Soybean	endoplasmic reticulum	36.5	33.14
KRH38153	Soybean	plastid	7.17	26.56

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100784395	MapMan:35.1	EMBL:ACUP02007744	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	EnsemblPlantsGene:GLYMA_12G191400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536	GO:GO:0009611	GO:GO:0009941
GO:GO:0009987	GO:GO:0010597	GO:GO:0016125	GO:GO:0016705	GO:GO:0016829	GO:GO:0020037
GO:GO:0046872	GO:GO:0055114	UniProt:I1LU31	InterPro:IPR036396	EnsemblPlants:KRH26745	ProteinID:KRH26745
ProteinID:KRH26745.1	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF49	SUPFAM:SSF48264
UniParc:UPI000233D8B3	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:35295823..35301648

Molecular Weight (calculated)

53194.9 Da

IEP (calculated)

8.034

GRAVY (calculated)

-0.105

Length

474 amino acids

Sequence
(BLAST)

001: MSLPPPSLVT AATPTELPIR QIPGSYGFPL LGPISDRLDY FWFQKPESFF RKRVEKYKST VFRTNVPPSF PFFVNVNPNV IAVLDVKSFS HLFDMDLVDK
101: KDVLVGDFVP SVAFTGNMRV GVYQDTTEPQ HSKVKNYIMD ILKRSSGIWV SELESNLDTL WDNIEASLSK SSSVSYLFPL QQFLFTFLCK VLAGADPARD
201: PKIAESGYSM LNSWLALQLL PTVSVGILQP LEEIFLHSFA YPFFLVGGNY NNLYNFIKQQ GKDTINRGAI GFGLTEEEAI HNLLFVLGFN SYGGFSIFLP
301: SLIDAIASNS ALQEKLKKEA REKGGSTLTF DSVKEMDLIQ SVVYETLRMN PPVPLQYGRA RKDFRLSSHD SVFHVKKGEL LCGFQKLVMR DSVIFDEPDR
401: FKPDRFTQEK GAQLLNYLYW SNGPQTGSPS VSNKQCAGKD VVTLTAALIV AYLFRRYDSI QGDGSSITAL QKTK

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.