Factsheet for Os02t0110200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 16531481

plasma membrane: 27800704

gfp PMID: 16531481 doi

EW Chehab, G Raman, JW Walley, JV Perea, G Banu, S Theg, K Dehesh

Section of Plant Biology, University of California, Davis, California 95616, USA.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G031100.2	Wheat	plastid	73.1	74.01
TraesCS6A01G027900.1	Wheat	plastid	73.51	73.97
TraesCS6B01G039500.1	Wheat	plastid	72.9	73.8
OQU84187	Sorghum	plastid	72.69	70.38
Zm00001d054067_P001	Maize	plasma membrane	71.87	69.72
HORVU6Hr1G005250.1	Barley	plastid	70.64	62.89
GSMUA_Achr6P13520_001	Banana	plastid	58.93	62.12
AT4G15440.1	Thale cress	cytosol	40.25	51.04
KRH26745	Soybean	plastid	49.28	50.63
CDX90591	Canola	plastid	50.31	50.1
CDY09763	Canola	cytosol, plastid	39.22	49.74
Bra012788.1-P	Field mustard	plastid	49.49	49.28
Solyc07g049690.2.1	Tomato	plastid	47.84	48.95
VIT_12s0059g01060.t01	Wine grape	plastid	48.67	48.67
PGSC0003DMT400002779	Potato	plastid	46.82	47.5
Os02t0218700-01	Rice	extracellular, plasma membrane	43.74	42.6
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	43.12	41.18
Os03t0767000-01	Rice	plastid	42.51	40.43
Os03t0225900-01	Rice	mitochondrion, plastid	39.01	39.75

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	EntrezGene:4328040	ProteinID:AFU07591.1	ProteinID:BAD07834.1	ProteinID:BAF07562.1
ProteinID:BAS76605.1	ProteinID:BAS76606.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	ProteinID:EAZ21458.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009536	GO:GO:0009611	GO:GO:0009941	GO:GO:0009987	GO:GO:0010597
GO:GO:0016125	GO:GO:0016705	GO:GO:0016829	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	EnsemblPlantsGene:Os02g0110200	EnsemblPlants:Os02t0110200-01	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF49	UniProt:Q6Z8Z7	SUPFAM:SSF48264	UniParc:UPI0000236811	RefSeq:XP_015626416.1	SEG:seg

Description

HYDROPEROXIDE LYASE 3Fatty acid 13-hydroperoxide lyase (CYP74B), Plant defense (Os02t0110200-01);Similar to Hydroperoxide lyase. (Os02t0110200-02)

Coordinates

chr2:+:554579..556320

Molecular Weight (calculated)

53713.6 Da

IEP (calculated)

5.574

GRAVY (calculated)

-0.029

Length

487 amino acids

Sequence
(BLAST)

001: MVPSFPQPAS AAAATRPIPG SYGPPLLGPL RDRLDYFWFQ GPDDFFRRRA ADHKSTVFRA NIPPTFPFFL GVDPRVVAVV DAAAFTALFD PALVDKRDVL
101: IGPYVPSLAF TRGTRVGVYL DTQDPDHART KAFSIDLLRR AARNWAAELR AAVDDMLAAV EEDLNRAPDP AAASASYLIP LQKCIFRFLC KALVGADPAA
201: DGLVDRFGVY ILDVWLALQL VPTQKVGVIP QPLEELLLHS FPLPSFVVKP GYDLLYRFVE KHGAAAVSIA EKEHGISKEE AINNILFVLG FNAFGGFSVF
301: LPFLVMEVGK PGRDDLRRRL REEVRRVLGG GDGGEAGFAA VREMALVRST VYEVLRMQPP VPLQFGRARR DFVLRSHGGA AYEVGKGELL CGYQPLAMRD
401: PAVFDRPEEF VPERFLGDDG EALLQYVYWS NGPETGEPSP GNKQCAAKEV VVATACMLVA ELFRRYDDFE CDGTSFTKLD KRELTPS

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.