CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 21417358

msms PMID: 21417358 doi

DR Demartini, R Jain, G Agrawal, JJ Thelen

Department of Biochemistry and Interdisciplinary Plant Group, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G15440.1	Thale cress	cytosol	77.6	77.6
Bra012788.1-P	Field mustard	plastid	97.14	76.28
CDX90591	Canola	plastid	97.14	76.28
KRH26745	Soybean	plastid	60.42	48.95
Solyc07g049690.2.1	Tomato	plastid	56.51	45.59
PGSC0003DMT400002779	Potato	plastid	56.25	45.0
VIT_12s0059g01060.t01	Wine grape	plastid	56.77	44.76
GSMUA_Achr6P13520_001	Banana	plastid	51.56	42.86
Os02t0110200-01	Rice	plastid	49.74	39.22
TraesCS6B01G039500.1	Wheat	plastid	47.4	37.84
TraesCS6A01G027900.1	Wheat	plastid	47.66	37.81
TraesCS6D01G031100.2	Wheat	plastid	47.14	37.63
Zm00001d054067_P001	Maize	plasma membrane	48.18	36.85
OQU84187	Sorghum	plastid	47.14	35.98
HORVU6Hr1G005250.1	Barley	plastid	47.66	33.46
CDY23912	Canola	plastid	37.5	27.22
CDY02409	Canola	plastid	37.5	27.22

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	GO:A0A078FCI9	UniProt:A0A078FCI9	EnsemblPlants:CDY09763	ProteinID:CDY09763
ProteinID:CDY09763.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00031462001	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF49	SUPFAM:SSF48264	UniParc:UPI0004EE024B	:

Description

BnaC07g32980DBnaC07g32980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCI9]

Coordinates

chrLK031998:-:884112..889311

Molecular Weight (calculated)

43004.5 Da

IEP (calculated)

5.164

GRAVY (calculated)

-0.086

Length

384 amino acids

Sequence
(BLAST)

001: MDLVDKRDVL IGDFRPSLDF YGGIRVGVFL DTTEPKHAKV KSFAMEILKR SSEVWLRELL SNLDTFWETV ESDISKNDDG ASYLIGLQRC IFNFLSTALT
101: GANPSVSPDI AENGWKMLDK WLAIQVIPTT KIGILQPFEE IFLHSWAYPF FLVAGDYQKL YNFISENAGD VIRLGDEEYG LTRDETVHNL IFVLGFNAYG
201: GFSVFLPSLI GRIAGDTSGL HERLRTEVRK VCGSGSVLNF RTVNEMELVK SVVYETLRLN PPVPLQYARA RGDFKISSHD AVYEVKKGEL LCGYQPLVMR
301: DANIFEDPEE FKPDRFVGQT GSKLLNYLFW SNGPQTGTPS ESNKQCAAKD MVTITAALII ANLFLRYDKI TGDAGSIKTV VKAT

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.