Factsheet for TraesCS6A01G027900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G039500.1	Wheat	plastid	95.66	96.26
TraesCS6D01G031100.2	Wheat	plastid	95.25	95.84
HORVU6Hr1G005250.1	Barley	plastid	89.26	78.98
Os02t0110200-01	Rice	plastid	73.97	73.51
OQU84187	Sorghum	plastid	69.21	66.6
Zm00001d054067_P001	Maize	plasma membrane	69.01	66.53
GSMUA_Achr6P13520_001	Banana	plastid	56.2	58.87
AT4G15440.1	Thale cress	cytosol	39.67	50.0
KRH26745	Soybean	plastid	48.76	49.79
CDY09763	Canola	cytosol, plastid	37.81	47.66
CDX90591	Canola	plastid	47.73	47.24
Bra012788.1-P	Field mustard	plastid	47.31	46.83
Solyc07g049690.2.1	Tomato	plastid	45.45	46.22
VIT_12s0059g01060.t01	Wine grape	plastid	46.49	46.2
PGSC0003DMT400002779	Potato	plastid	44.83	45.21
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	38.22	38.38
TraesCS5A01G403200.1	Wheat	plastid	40.08	38.19
TraesCS4A01G061800.1	Wheat	plastid	37.4	37.71
TraesCS6A01G185100.1	Wheat	mitochondrion, plastid	39.67	36.29

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536	GO:GO:0009611	GO:GO:0009941
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PANTHER:PTHR24286
PANTHER:PTHR24286:SF49	SUPFAM:SSF48264	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G027900	EnsemblPlants:TraesCS6A01G027900.1	SEG:seg

Description

No Description!

Coordinates

chr6A:+:14301738..14303192

Molecular Weight (calculated)

53323.1 Da

IEP (calculated)

5.751

GRAVY (calculated)

-0.025

Length

484 amino acids

Sequence
(BLAST)

001: MLPSFSPAAT AAATPPPKPI PGGYGAPVLG PLRDRLDYFW FQGPEEFFRR RAAQYRSTVF RANIPPTFPF FVGVNPRVVA IVDTAAFTAL FDPELVDKRD
101: CLIGPYNPSD SFTGGTRVGV YLDTEEPEHE RTKAFAMDLL RRSSRVWAPE FLEGVDGMLA AIESDLDAGK GKDGGASFLV PLQKCIFRFL CRSVASADPA
201: AEDLVDRYGL FILDVWLGLQ LVPTQKIGAI PQPLEELLLH SFPFPSILVK PGYDLLYRFL EKHGAESVAV GVKDHGMTDK DAINNILFLL GFNAFGGFSV
301: FLPFLILQVG KDAALRARLR DEVRAALERH AGEVGFASVR GMPLVRSTVY EVLRMNPPVP LQFGRARRDF VLRSHGGEGF SVAAGEMLCG YQPLAMRDPA
401: VFDRPDEFVA DRFVGAEGEA LLRYVYWSNG PETGEPAAGN KQCAAKEVVV ATACMLVAEL FRRYDDFECD GTAFTRLHKR PQPS

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.