Factsheet for TraesCS6A01G185100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G172200.1	Wheat	cytosol, plastid	90.93	97.96
TraesCS6B01G213300.1	Wheat	plastid	96.22	97.7
HORVU6Hr1G039440.1	Barley	plasma membrane	85.82	92.46
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	72.02	74.71
Os02t0218700-01	Rice	extracellular, plasma membrane	69.57	73.6
EES04752	Sorghum	cytosol	69.75	70.29
Zm00001d053586_P001	Maize	cytosol	67.49	70.14
TraesCS4A01G061900.1	Wheat	cytosol, golgi, unclear	45.18	49.59
TraesCS4A01G061800.1	Wheat	plastid	44.99	49.58
KRH15274	Soybean	cytosol	36.67	46.41
TraesCS5A01G403200.1	Wheat	plastid	43.48	45.28
PGSC0003DMT400002934	Potato	plastid	43.1	44.71
Solyc11g069800.1.1	Tomato	plastid	42.91	44.51
KRH05758	Soybean	nucleus, plastid	43.67	44.51
KRH61218	Soybean	nucleus, plastid	42.34	42.99
AT5G42650.1	Thale cress	plastid	41.78	42.66
PGSC0003DMT400043495	Potato	plastid	42.16	42.08
CDY02409	Canola	plastid	41.59	41.59
Solyc04g079730.1.1	Tomato	plastid	41.97	41.57
CDY23912	Canola	plastid	41.4	41.4
Bra035320.1-P	Field mustard	plastid	41.4	41.4
VIT_18s0001g11630.t01	Wine grape	plastid	39.7	40.38
TraesCS6A01G027900.1	Wheat	plastid	36.29	39.67
KRH38153	Soybean	plastid	6.05	25.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00465
PANTHER:PTHR24286	PANTHER:PTHR24286:SF45	SUPFAM:SSF48264	EnsemblPlantsGene:TraesCS6A01G185100	EnsemblPlants:TraesCS6A01G185100.1	SEG:seg

Description

No Description!

Coordinates

chr6A:+:216461871..216463460

Molecular Weight (calculated)

57996.9 Da

IEP (calculated)

8.551

GRAVY (calculated)

-0.009

Length

529 amino acids

Sequence
(BLAST)

001: MYVPLFYIMQ KSWSLSKTSY SLELSIAFGD RLALAHPAMT SKVANSSGSD NADAKLSPSG LPVREVPGGY GVPFLSPLRD RLDYYYFQGA EEYFRSRIAR
101: NGGATVLRVN MPPGPFITAD SRVVAFLDAR SFSVLLDDAK VDKTDTLDGT FMPSLALFGG YRPLAFLDAA DPRHAALKRV MISLAAARMH HVAPVFRIAF
201: GAVFDAADAG LGDGPVQFNK LNEHHMFDFT CSALFGGTPP SKAMGDGAVT KAIKWLGVQL HPLASKIIKP WLLEDLLLHT FRLPPLLVRR DYADLTAYFA
301: EAAAGFLNDA DKAQSGISRD ELLHNLVFTA IFNAYGGFKI FLPHVIKWLA RAGPALHARL ASEVRAAVPN GSDITVSAVD KMPLVKSVVW EALRMNPPVE
401: FQYGRARQDL VVESHAAAYQ VRKGEMLFGY QPLATRDERV FKQAGEFVPD RFVGGEGRLL GNVVWSNGPE NSEPAEGNKQ CPGKDMVVAV GRLMVAELFR
501: RYDTFTADVK EMPLEPVVTF TSLTRAKAE

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.