Factsheet for TraesCS6D01G172200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G039440.1	Barley	plasma membrane	92.06	92.06
TraesCS6B01G213300.1	Wheat	plastid	96.74	91.17
TraesCS6A01G185100.1	Wheat	mitochondrion, plastid	97.96	90.93
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	76.99	74.12
Os02t0218700-01	Rice	extracellular, plasma membrane	75.15	73.8
Zm00001d053586_P001	Maize	cytosol	72.91	70.33
EES04752	Sorghum	cytosol	75.15	70.29
TraesCS4D01G238800.1	Wheat	cytosol, golgi	48.47	49.38
TraesCS4D01G238700.1	Wheat	plastid	48.27	49.38
KRH15274	Soybean	cytosol	39.71	46.65
TraesCS5D01G413200.1	Wheat	plastid	46.64	45.08
PGSC0003DMT400002934	Potato	plastid	46.03	44.31
Solyc11g069800.1.1	Tomato	plastid	45.82	44.12
KRH05758	Soybean	nucleus, plastid	46.03	43.55
AT5G42650.1	Thale cress	plastid	45.01	42.66
KRH61218	Soybean	nucleus, plastid	45.21	42.61
PGSC0003DMT400043495	Potato	plastid	45.01	41.7
Solyc04g079730.1.1	Tomato	plastid	45.01	41.39
CDY02409	Canola	plastid	44.2	41.02
CDY23912	Canola	plastid	43.99	40.83
Bra035320.1-P	Field mustard	plastid	43.99	40.83
VIT_18s0001g11630.t01	Wine grape	plastid	42.97	40.58
TraesCS6D01G031100.2	Wheat	plastid	39.51	40.33
KRH38153	Soybean	plastid	6.11	23.44

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00465
PANTHER:PTHR24286	PANTHER:PTHR24286:SF45	SUPFAM:SSF48264	EnsemblPlantsGene:TraesCS6D01G172200	EnsemblPlants:TraesCS6D01G172200.1	SEG:seg

Description

No Description!

Coordinates

chr6D:+:158817419..158818894

Molecular Weight (calculated)

53650.4 Da

IEP (calculated)

8.226

GRAVY (calculated)

-0.060

Length

491 amino acids

Sequence
(BLAST)

001: MTSKVANSSG SNNADAKLSP SGLPVREVPG GYGVPFLSPL RDRLDYYYFQ GAEEYFRSRI ARNGGATVLR VNMPPGPFIT TDSRVVAFLD ARSFSVLLDD
101: AKVDKTDTLD GTFMPSLALF GGYRPLAFLD AADPHHAALK RVMISLAAAR MHHVAPAFRT AFGAVFDAAD AGLGDGPVQF NKLNEHHMFD FTCSALFGGT
201: PPSKAMGDGA VTKAIKWLGV QLHPLASKII KPWLLEDLLL HTFRLPPLLV RRDYADLTAY FAEAAAGVLN DADKAQSGIS RDELLHNLVF TAIFNAYGGF
301: KIFLPHVIKW LARAGPALHA RLASEVRAAV PNGSDITVPA VDKMPLVKSV VWEALRMNPP VEFQYGRARQ DLVVESHDAA YRVRKGEMLF GYQPLATRDE
401: RVFKQAGEFV PDRFVGGEGR LLGNVVWSNG PENSEPAEGN KQCPGKDVVV AVGRLMVAEL FRRYDTFTAD VKEMPLEPVV TFTSLTRAKA E

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.