Factsheet for Bra035320.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra035381.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	Bra035381.1-P	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02409	Canola	plastid	99.62	99.62
CDY23912	Canola	plastid	98.11	98.11
AT5G42650.1	Thale cress	plastid	75.8	77.41
KRH15274	Soybean	cytosol	50.47	63.88
VIT_18s0001g11630.t01	Wine grape	plastid	60.3	61.35
KRH05758	Soybean	nucleus, plastid	59.36	60.5
PGSC0003DMT400043495	Potato	plastid	60.49	60.38
Solyc04g079730.1.1	Tomato	plastid	60.87	60.3
KRH61218	Soybean	nucleus, plastid	59.17	60.08
PGSC0003DMT400002934	Potato	plastid	57.47	59.61
GSMUA_Achr4P32370_001	Banana	plastid	55.77	59.48
Solyc11g069800.1.1	Tomato	plastid	56.52	58.63
GSMUA_Achr8P02880_001	Banana	plastid	55.58	57.76
EER90827	Sorghum	plastid	54.82	56.64
Os03t0767000-01	Rice	plastid	54.25	56.05
Zm00001d013185_P001	Maize	plastid	54.06	55.97
HORVU5Hr1G098090.1	Barley	plastid	53.5	55.71
TraesCS5D01G413200.1	Wheat	plastid	52.55	54.72
TraesCS5A01G403200.1	Wheat	plastid	52.36	54.53
Zm00001d034184_P001	Maize	plasma membrane, plastid	52.93	54.26
TraesCS5B01G408000.1	Wheat	plastid	52.55	54.19
Zm00001d034186_P001	Maize	plastid	52.74	53.76
TraesCS6D01G172200.1	Wheat	cytosol, plastid	40.83	43.99
Os02t0218700-01	Rice	extracellular, plasma membrane	40.83	43.2
HORVU6Hr1G039440.1	Barley	plasma membrane	40.08	43.18
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	41.21	42.75
EES04752	Sorghum	cytosol	41.4	41.71
Zm00001d053586_P001	Maize	cytosol	40.08	41.65
TraesCS6A01G185100.1	Wheat	mitochondrion, plastid	41.4	41.4
TraesCS6B01G213300.1	Wheat	plastid	40.64	41.27
Bra012788.1-P	Field mustard	plastid	36.86	39.88
KRH38153	Soybean	plastid	8.32	34.38
GSMUA_Achr2P13300_001	Banana	cytosol	52.55	21.99

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	EnsemblPlantsGene:Bra035320	EnsemblPlants:Bra035320.1	EnsemblPlants:Bra035320.1-P	InterPro:Cyt_P450
InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009620	GO:GO:0009695	GO:GO:0009719	GO:GO:0009753	GO:GO:0009941
GO:GO:0009978	GO:GO:0009987	GO:GO:0010287	GO:GO:0016020	GO:GO:0016705	GO:GO:0020037
GO:GO:0031407	GO:GO:0046872	GO:GO:0050832	GO:GO:0055114	InterPro:IPR036396	UniProt:M4F2M1
PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF50	SUPFAM:SSF48264	UniParc:UPI000253E5ED
SEG:seg	:	:	:	:	:

Description

AT5G42650 (E=2e-226) AOS, CYP74A, DDE2 | AOS (ALLENE OXIDE SYNTHASE); allene oxide synthase/ hydro-lyase/ oxygen binding

Coordinates

chrScaffold000103:-:494294..495883

Molecular Weight (calculated)

59112.0 Da

IEP (calculated)

9.242

GRAVY (calculated)

-0.245

Length

529 amino acids

Sequence
(BLAST)

001: MASASPHFPI SLHARLHQTT TARSTPLKFS STRVLTRPIK ASTSETPPDL AVETRTGSGS KDLPIRTIPG SYGLPIIGPL KDRNDYFHKQ KPEEFFKSRI
101: RKYNSTVFRV NMPPGGFIAD NPQVVALLDG KSFPVLFDVD KVEKKDIFTG TYMPSTERTG GYRILSYLDP SEPNHAKLKS LLFHLLKSSR NRIFPEFKAT
201: YSELFDSIEK ELAANGKADF GGPGDAAAFN FLARAMYGKD PADTKLGSDA PSLITKWVFF NLHPLLTLGL PSIIEDPLLH TFRLPSALVK SDYQRLYEFF
301: LESSGEILVE AEKLGISREE AAHNLLFATC FNTWGGMKIL FSNLVKRVGR AGTKLQIRLA EEIRSVIKSN GGELTMGGIE QMELTKSVVF ECLRFEPPVP
401: AQYARAKKDF VIESHDAAFR VKAGEMLYGY QPLATRDPKI FERAEEFVPE RFLGEEGERL LQHVVWSNGP QTENPTVGNK QCAGKDFVVL VARLFLIEIF
501: RRYDSFDIEV GSSPLGSSVT FTSLRKASF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.