Factsheet for Os03t0767000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0362300-03

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	Os10t0362300-03	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90827	Sorghum	plastid	86.72	86.72
Zm00001d013185_P001	Maize	plastid	85.55	85.71
Zm00001d034184_P001	Maize	plasma membrane, plastid	84.77	84.11
TraesCS5A01G403200.1	Wheat	plastid	83.2	83.86
HORVU5Hr1G098090.1	Barley	plastid	83.2	83.86
TraesCS5B01G408000.1	Wheat	plastid	83.98	83.82
TraesCS5D01G413200.1	Wheat	plastid	82.81	83.46
Zm00001d034186_P001	Maize	plastid	83.59	82.47
GSMUA_Achr4P32370_001	Banana	plastid	64.45	66.53
KRH15274	Soybean	cytosol	52.54	64.35
GSMUA_Achr8P02880_001	Banana	plastid	63.09	63.46
KRH05758	Soybean	nucleus, plastid	58.79	58.0
KRH61218	Soybean	nucleus, plastid	58.01	57.01
PGSC0003DMT400043495	Potato	plastid	58.98	56.98
Solyc04g079730.1.1	Tomato	plastid	59.38	56.93
VIT_18s0001g11630.t01	Wine grape	plastid	57.23	56.35
PGSC0003DMT400002934	Potato	plastid	55.86	56.08
AT5G42650.1	Thale cress	plastid	55.66	55.02
CDY02409	Canola	plastid	56.45	54.63
Bra035320.1-P	Field mustard	plastid	56.05	54.25
CDY23912	Canola	plastid	56.05	54.25
Os03t0225900-01	Rice	mitochondrion, plastid	50.0	53.56
Solyc11g069800.1.1	Tomato	plastid	53.32	53.53
Os02t0218700-01	Rice	extracellular, plasma membrane	44.53	45.6
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	45.31	45.49
Os02t0110200-01	Rice	plastid	40.43	42.51
KRH38153	Soybean	plastid	7.81	31.25
GSMUA_Achr2P13300_001	Banana	cytosol	60.35	24.45

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	EntrezGene:4334233	ProteinID:AAP50956.1	ProteinID:AAR87328.1	EMBL:AB116527
ProteinID:ABF99059.1	ProteinID:ABV45433.1	EMBL:AK068620	ProteinID:BAF13300.1	ProteinID:BAS86563.1	InterPro:Cyt_P450
InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	EMBL:EU090801	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009620	GO:GO:0009695
GO:GO:0009719	GO:GO:0009753	GO:GO:0009941	GO:GO:0009978	GO:GO:0009987	GO:GO:0010287
GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016705	GO:GO:0016829	GO:GO:0020037
GO:GO:0031407	GO:GO:0031408	GO:GO:0031969	GO:GO:0046872	GO:GO:0047987	GO:GO:0050832
GO:GO:0055114	InterPro:IPR036396	EMBL:LC163980	EnsemblPlantsGene:Os03g0767000	EnsemblPlants:Os03t0767000-01	PFAM:PF00067
PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF50	UniProt:Q10EK5	UniProt:Q7Y0C8	SUPFAM:SSF48264
UniParc:UPI00001A3AFA	RefSeq:XP_015631686.1	SEG:seg	:	:	:

Description

ALLENE OXIDE SYNTHASE 1Allene oxide synthase (CYP74A1), Biosynthesis of jasmonic acid (JA) (Os03t0767000-01)

Coordinates

chr3:-:31764991..31766985

Molecular Weight (calculated)

56507.4 Da

IEP (calculated)

9.519

GRAVY (calculated)

-0.071

Length

512 amino acids

Sequence
(BLAST)

001: MATAAACISF ASPSPARVVI RRQTRASASA SATDRQEVVS PKRRLPLRKV PGDYGPPVVG AIRDRYEYFY GPGGRDGFFA ARVRAHRSTV VRLNMPPGPF
101: VARDPRVVAL LDAASFPVLF DTSLVDKTDL FTGTFMPSTD LTGGYRVLSY LDPSEPNHAP LKTLLFYLLS HRRQQVIPKF REVYGDLFGL MENDLARVGK
201: ADFGVHNDAA AFGFLCQGLL GRDPAKSALG RDGPKLITKW VLFQLSPLLS LGLPTLVEDT LLHSLRLPPA LVKKDYDRLA DFFRDAAKAV VDEGERLGIA
301: REEAVHNILF ALCFNSFGGM KILFPTLVKW LGRAGARVHG RLATEVRGAV RDNGGEVTMK ALAEMPLVKS AVYEALRIEP PVAMQYGRAK RDMVVESHDY
401: GYEVREGEML FGYQPMATKD PRVFARPEEY VPDRFLGEDG ARLLRHVVWS NGPETAAPTL HDKQCAGKDF VVLVARLLLV ELFLRYDSFD VEVGTSTLGS
501: SVTVTSLKKA TF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.