CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74635
CDY47297

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	CDX74635	AT5G35750.1	18642946
AT5G42650.1	CDY47297	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02409	Canola	plastid	98.49	98.49
Bra035320.1-P	Field mustard	plastid	98.11	98.11
AT5G42650.1	Thale cress	plastid	75.8	77.41
KRH15274	Soybean	cytosol	51.04	64.59
VIT_18s0001g11630.t01	Wine grape	plastid	59.92	60.96
KRH05758	Soybean	nucleus, plastid	59.74	60.89
Solyc04g079730.1.1	Tomato	plastid	61.25	60.67
PGSC0003DMT400043495	Potato	plastid	60.68	60.57
KRH61218	Soybean	nucleus, plastid	59.55	60.46
PGSC0003DMT400002934	Potato	plastid	57.66	59.8
GSMUA_Achr4P32370_001	Banana	plastid	55.95	59.68
Solyc11g069800.1.1	Tomato	plastid	56.9	59.02
GSMUA_Achr8P02880_001	Banana	plastid	55.58	57.76
EER90827	Sorghum	plastid	54.82	56.64
Zm00001d013185_P001	Maize	plastid	54.25	56.16
Os03t0767000-01	Rice	plastid	54.25	56.05
HORVU5Hr1G098090.1	Barley	plastid	53.5	55.71
TraesCS5D01G413200.1	Wheat	plastid	52.93	55.12
TraesCS5A01G403200.1	Wheat	plastid	52.74	54.92
TraesCS5B01G408000.1	Wheat	plastid	52.93	54.58
Zm00001d034184_P001	Maize	plasma membrane, plastid	52.93	54.26
Zm00001d034186_P001	Maize	plastid	52.74	53.76
TraesCS6D01G172200.1	Wheat	cytosol, plastid	40.83	43.99
Os02t0218700-01	Rice	extracellular, plasma membrane	40.83	43.2
HORVU6Hr1G039440.1	Barley	plasma membrane	40.08	43.18
Os02t0218800-01	Rice	cytosol, plasma membrane, plastid, vacuole	41.02	42.55
EES04752	Sorghum	cytosol	41.21	41.52
Zm00001d053586_P001	Maize	cytosol	39.89	41.45
TraesCS6A01G185100.1	Wheat	mitochondrion, plastid	41.4	41.4
TraesCS6B01G213300.1	Wheat	plastid	40.64	41.27
CDX90591	Canola	plastid	36.86	39.88
CDY09763	Canola	cytosol, plastid	27.22	37.5
KRH38153	Soybean	plastid	8.13	33.59
GSMUA_Achr2P13300_001	Banana	cytosol	53.12	22.23

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.7.1.3	GO:A0A078GFK6	UniProt:A0A078GFK6	EnsemblPlants:CDY23912	ProteinID:CDY23912
ProteinID:CDY23912.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00024361001	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF50	SUPFAM:SSF48264	UniParc:UPI0002B26EE7	SEG:seg

Description

BnaC02g29610DBnaC02g29610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFK6]

Coordinates

chrLK032151:+:50902..52599

Molecular Weight (calculated)

59027.9 Da

IEP (calculated)

8.893

GRAVY (calculated)

-0.215

Length

529 amino acids

Sequence
(BLAST)

001: MASPSPPFPI SLHATLHQTT TARSTPLKFS STRVLTRPIK ASTSETPPDL AVETRTGSGS KDLPIRTIPG SYGLPIIGPL KDRNDYFHKQ KPEEFFKSRI
101: RTYNSTVFRV NMPPGGFIAD NPQVVALLDG KSFPVLFDVD KVEKKDLFTG TYMPSTELTG GYRILSYLDP SEPNHAKLKS LLFHLLKSSR NRIFPEFKAT
201: YSELFDSIEK ELAVNGKADF GGPGDAAAFN FLARAMYGKN PADTKLGSDA PSLITKWVFF NLHPLLTLGL PSIIEDPLLH TFRLPSALIK SDYQRLYEFF
301: LESSGEILIE AEKLGISREE AAHNLLFATC FNTWGGMKIL FSNLVKRVGR AGTKLQIRLA EEIRSVIKSN GGELTMGGIE QMELTKSVVF ECLRFEPPVP
401: AQYARAKKDF VIESHDAAFR VKAGEMLYGY QPLATRDPKI FERAEEFVPE RFLGEEGERL LQHVVWSNGP QTENPTVGNK QCAGKDFVVL VARLFLIEIF
501: RRYDSFDIEV GSSPLGSSVT FTSLRKASF

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.