Factsheet for Zm00001d013185_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014297_P006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42650.1	Zm00001d014297_P006	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90827	Sorghum	plastid	93.54	93.36
Zm00001d034186_P001	Maize	plastid	90.8	89.4
Zm00001d034184_P001	Maize	plasma membrane, plastid	90.22	89.34
Os03t0767000-01	Rice	plastid	85.71	85.55
HORVU5Hr1G098090.1	Barley	plastid	81.8	82.28
TraesCS5D01G413200.1	Wheat	plastid	81.6	82.09
TraesCS5A01G403200.1	Wheat	plastid	81.41	81.89
TraesCS5B01G408000.1	Wheat	plastid	81.6	81.29
GSMUA_Achr4P32370_001	Banana	plastid	64.58	66.53
GSMUA_Achr8P02880_001	Banana	plastid	64.38	64.64
KRH15274	Soybean	cytosol	52.84	64.59
KRH61218	Soybean	nucleus, plastid	59.88	58.73
KRH05758	Soybean	nucleus, plastid	59.49	58.57
PGSC0003DMT400002934	Potato	plastid	57.93	58.04
PGSC0003DMT400043495	Potato	plastid	58.32	56.23
VIT_18s0001g11630.t01	Wine grape	plastid	56.95	55.96
Solyc11g069800.1.1	Tomato	plastid	55.19	55.29
Solyc04g079730.1.1	Tomato	plastid	57.34	54.87
AT5G42650.1	Thale cress	plastid	55.58	54.83
CDY02409	Canola	plastid	56.36	54.44
CDY23912	Canola	plastid	56.16	54.25
Bra035320.1-P	Field mustard	plastid	55.97	54.06
Zm00001d048021_P001	Maize	plasma membrane	50.88	53.94
Zm00001d028282_P001	Maize	plastid	50.29	53.32
Zm00001d053586_P001	Maize	cytosol	44.42	44.6
Zm00001d054067_P001	Maize	plasma membrane	38.94	39.64
KRH38153	Soybean	plastid	7.83	31.25
GSMUA_Achr2P13300_001	Banana	cytosol	58.32	23.58

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:103625850	MapMan:11.7.1.3	UniProt:A0A1D6GGD7	ProteinID:AQK62615.1	InterPro:Cyt_P450
InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF50
SUPFAM:SSF48264	UniParc:UPI00022175AA	EnsemblPlantsGene:Zm00001d013185	EnsemblPlants:Zm00001d013185_P001	EnsemblPlants:Zm00001d013185_T001	SEG:seg

Description

Allene oxide synthase chloroplastic

Coordinates

chr5:+:6100495..6102030

Molecular Weight (calculated)

56587.2 Da

IEP (calculated)

9.282

GRAVY (calculated)

-0.139

Length

511 amino acids

Sequence
(BLAST)

001: MATAIYLSSP AAPSSCARQR RQTTRATASA TDRPREVVSP KRRLPLRKVP GDYGPPVLGA IRDRFEYFYG PGGRDGFFTS RVRAHGSTVV RLNMPPGPFV
101: ARDPRVVALL DAASFPVLFD TSLVDKTDLF TGTFMPSTEL TGGYRVLSYL DPAEPNHGPL KTLLFYLLSH RRQHVIPKFR EVYGDLFGLM ENELARVGKA
201: DFGHYNDAAA FSFLCQALLG RDPAESALQG DGPKLITKWV LFQLSPLLSL GLPKHVEDSL LHSFRLPPAL VKKDYDRLAD FFRDAARRVV DEGERLGVAR
301: EEAVHNILFA MCFNSFGGMK ILFPSLVKWL GRAGGRAHGR LATEVRDAVR AHGGEVTMKA LAEMPLVKSA VYEALRIEPP VAMQYGRAKQ DMVVESHDYG
401: FEVREGEMLF GYQPMATKDP RVFARAEEYV PDRFLGEDGA QLLRHVVWSN GPETASPTLQ DKQCAGKDFV VLIARLLVAE LFLRYDSFDV QVGASALGSS
501: VTITSLKKAT F

Best Arabidopsis Sequence Match ( AT5G42650.1 )
(BLAST)

001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF

Arabidopsis Description

CYP74AAllene oxide synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96242]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.