Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84187 | Sorghum | plastid | 86.65 | 86.48 |
| Os02t0110200-01 | Rice | plastid | 69.72 | 71.87 |
| TraesCS6B01G039500.1 | Wheat | plastid | 66.53 | 69.44 |
| TraesCS6D01G031100.2 | Wheat | plastid | 66.14 | 69.02 |
| TraesCS6A01G027900.1 | Wheat | plastid | 66.53 | 69.01 |
| GSMUA_Achr6P13520_001 | Banana | plastid | 54.98 | 59.74 |
| HORVU6Hr1G005250.1 | Barley | plastid | 64.94 | 59.6 |
| AT4G15440.1 | Thale cress | cytosol | 37.65 | 49.22 |
| KRH26745 | Soybean | plastid | 45.62 | 48.31 |
| CDY09763 | Canola | cytosol, plastid | 36.85 | 48.18 |
| CDX90591 | Canola | plastid | 46.61 | 47.85 |
| Bra012788.1-P | Field mustard | plastid | 46.02 | 47.24 |
| Solyc07g049690.2.1 | Tomato | plastid | 43.82 | 46.22 |
| VIT_12s0059g01060.t01 | Wine grape | plastid | 44.82 | 46.2 |
| PGSC0003DMT400002779 | Potato | plastid | 43.63 | 45.62 |
| Zm00001d048021_P001 | Maize | plasma membrane | 38.65 | 40.25 |
| Zm00001d028282_P001 | Maize | plastid | 38.05 | 39.63 |
| Zm00001d034186_P001 | Maize | plastid | 40.44 | 39.11 |
| Zm00001d034184_P001 | Maize | plasma membrane, plastid | 40.04 | 38.95 |
| Zm00001d013185_P001 | Maize | plastid | 39.64 | 38.94 |
| Zm00001d053586_P001 | Maize | cytosol | 37.25 | 36.74 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:35.1 | EntrezGene:542163 | ProteinID:AQK61164.1 | UniProt:B4G010 | EMBL:BT042698 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_E_grp-IV | InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 | GO:GO:0009611 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010597 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016705 |
| GO:GO:0016829 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | PFAM:PF00067 |
| PRINTS:PR00465 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF49 | SUPFAM:SSF48264 | UniParc:UPI00017B7856 | EnsemblPlantsGene:Zm00001d054067 |
| EnsemblPlants:Zm00001d054067_P001 | EnsemblPlants:Zm00001d054067_T001 | SEG:seg | : | : | : |
Description
hydroperoxide lyase1Probable inactive linolenate hydroperoxide lyase
Coordinates
chr4:-:245806161..245807669
Molecular Weight (calculated)
55444.5 Da
IEP (calculated)
6.133
GRAVY (calculated)
-0.037
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPSFVSPTA SAAASVTPPP RPIPGSYGPP VLGPLRDRLD YFWFQSQDEF FRKRAAAHRS TVFRTNIPPT FPFFVGVDPR VVAIVDAAAF TALFDPDLVD
101: KRDILIGPYN PGAGFTGGTR VGVYLDTQEE EHARVKTFAM DLLHRSARTW SADFRASVGA MLDAVDAEFG KDDGSDKKPS ASYLVPLQQC IFRFLCKAFV
201: GADPSADWLV DNFGFTILDI WLALQILPTQ KIGLVQPLEE LLIHSFPLPS FLIWPGYYVL YRFIEKHGAE AVAYAEAQHG IGKKDAINNM LFVLGFNAFG
301: GFSVFLPFLV AKVGGAPALR ERLRDEVRRA MVGKDGEFGF ATVREDMPLV RSTVYEMLRM QPPVPLQFGR ARRDFVLRSH GGAAYQVSAG EVLCGYQPLA
401: MRDPEVFERP EEFVPERFLG DEGARLLQHL FWSNGPETAQ PGPGNKQCAA KEVVVDTACM LLAELFRRYD DFEVEGTSFT KLVKRQASPS VAQAAAAAGA
501: QQ
101: KRDILIGPYN PGAGFTGGTR VGVYLDTQEE EHARVKTFAM DLLHRSARTW SADFRASVGA MLDAVDAEFG KDDGSDKKPS ASYLVPLQQC IFRFLCKAFV
201: GADPSADWLV DNFGFTILDI WLALQILPTQ KIGLVQPLEE LLIHSFPLPS FLIWPGYYVL YRFIEKHGAE AVAYAEAQHG IGKKDAINNM LFVLGFNAFG
301: GFSVFLPFLV AKVGGAPALR ERLRDEVRRA MVGKDGEFGF ATVREDMPLV RSTVYEMLRM QPPVPLQFGR ARRDFVLRSH GGAAYQVSAG EVLCGYQPLA
401: MRDPEVFERP EEFVPERFLG DEGARLLQHL FWSNGPETAQ PGPGNKQCAA KEVVVDTACM LLAELFRRYD DFEVEGTSFT KLVKRQASPS VAQAAAAAGA
501: QQ
001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK
Arabidopsis Description
CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.