Factsheet for TraesCS6B01G039500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G031100.2	Wheat	plastid	96.26	96.26
TraesCS6A01G027900.1	Wheat	plastid	96.26	95.66
HORVU6Hr1G005250.1	Barley	plastid	89.81	78.98
Os02t0110200-01	Rice	plastid	73.8	72.9
OQU84187	Sorghum	plastid	69.65	66.6
Zm00001d054067_P001	Maize	plasma membrane	69.44	66.53
GSMUA_Achr6P13520_001	Banana	plastid	55.93	58.23
AT4G15440.1	Thale cress	cytosol	39.29	49.22
KRH26745	Soybean	plastid	48.23	48.95
CDY09763	Canola	cytosol, plastid	37.84	47.4
CDX90591	Canola	plastid	47.61	46.83
Bra012788.1-P	Field mustard	plastid	47.19	46.42
VIT_12s0059g01060.t01	Wine grape	plastid	46.78	46.2
Solyc07g049690.2.1	Tomato	plastid	45.53	46.01
PGSC0003DMT400002779	Potato	plastid	44.91	45.0
TraesCS5B01G408000.1	Wheat	plastid	40.96	38.4
TraesCS4B01G237600.1	Wheat	cytosol, plastid	38.25	38.17
TraesCS4B01G237500.1	Wheat	plastid	37.63	37.71
TraesCS6B01G213300.1	Wheat	plastid	39.92	36.85

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536
GO:GO:0009611	GO:GO:0009941	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396
PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286	PANTHER:PTHR24286:SF49	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6B01G039500	EnsemblPlants:TraesCS6B01G039500.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:-:23658461..23659906

Molecular Weight (calculated)

53171.0 Da

IEP (calculated)

5.749

GRAVY (calculated)

-0.020

Length

481 amino acids

Sequence
(BLAST)

001: MLPSFSPAAT VAVTPPPKPI PGGYGAPVLG PLRDRLDYFW FQGPEEYFRR RAAQYRSTVF RANIPPTFPF FVGVNPRVVA IVDTAAFTAL FDPELVDKRD
101: CLIGPYNPSD SFTGGTRVGV YLDTEEPEHE RTKAFAMDLL RRSSRVWAPE FLEGVDGMLA AIESDLDAGK EGGASFLVPL QKCIFRFLCR AVASADPAAE
201: DLVDRYGLFI LDVWLGLQLV PTQKIGAIPQ PLEELLLHSF PFPSILVKPG YDLLYRFLEK HGAASVAVGV KDHSMTDKDA INNILFLLGF NAFGGFSVFL
301: PFLILQVGKD AALRARLRDE VRAALEQHNG EVGFASVRGM PLVRSTVYEV LRMNPPVPLQ FGRARRDFVL RSHGGEGFSV AAGEMLCGYQ PLAMRDPAVF
401: DRPEEFVADR FVGAEGEALL RYVYWSNGPE TGEPTKGNKQ CAAKEVVVAT ACMLVAELFR RYDDFECDGT AFTKLHKRQP S

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.