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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d054067_P001 Maize plasma membrane 86.48 86.65
Os02t0110200-01 Rice plastid 70.38 72.69
TraesCS6D01G031100.2 Wheat plastid 66.8 69.85
TraesCS6B01G039500.1 Wheat plastid 66.6 69.65
TraesCS6A01G027900.1 Wheat plastid 66.6 69.21
HORVU6Hr1G005250.1 Barley plastid 66.4 61.06
GSMUA_Achr6P13520_001 Banana plastid 54.87 59.74
AT4G15440.1 Thale cress cytosol 37.57 49.22
KRH26745 Soybean plastid 46.12 48.95
CDY09763 Canola cytosol, plastid 35.98 47.14
CDX90591 Canola plastid 45.53 46.83
Solyc07g049690.2.1 Tomato plastid 43.94 46.43
VIT_12s0059g01060.t01 Wine grape plastid 44.93 46.41
Bra012788.1-P Field mustard plastid 44.73 46.01
PGSC0003DMT400002779 Potato plastid 43.54 45.62
OQU92970 Sorghum cytosol 37.77 39.34
EER90827 Sorghum plastid 39.36 38.67
EES04752 Sorghum cytosol 37.57 36.0
Protein Annotations
Gene3D:1.10.630.10MapMan:35.1UniProt:A0A1Z5RKJ8ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006629GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009536GO:GO:0009611GO:GO:0009941GO:GO:0009987
GO:GO:0010597GO:GO:0016705GO:GO:0016829GO:GO:0020037GO:GO:0046872GO:GO:0055114
InterPro:IPR036396EnsemblPlants:OQU84187ProteinID:OQU84187ProteinID:OQU84187.1PFAM:PF00067PRINTS:PR00465
PANTHER:PTHR24286PANTHER:PTHR24286:SF49EnsemblPlantsGene:SORBI_3004G007500SUPFAM:SSF48264UniParc:UPI000B426A78SEG:seg
Description
hypothetical protein
Coordinates
chr4:+:665105..667038
Molecular Weight (calculated)
55441.4 Da
IEP (calculated)
6.433
GRAVY (calculated)
-0.026
Length
503 amino acids
Sequence
(BLAST)
001: MLPSFVSPTA SASVTPPPRP IPGSHGPPVL GPLRDRLDYF WFQSQDEFFR KRAAAHRSTV FRTNIPPTFP FFVGIDPRVV AIVDAAAFTA LFDPDLVDKR
101: DILIGPYNPG TGFTGGTRVG VYLDTQEAEH TRIKTFAMDL LHRSARSWPA EFRAGVGAML DAVDADFAAN KASSASYLVP LQQCIFRFLC KAFAGADPSA
201: DWLVDNFGFT ILDIWLALQI LPTQKVGVVQ PLEELLIHSF PLPSFLIWPG YYLLYRFVEK HGAEAVAYAE TQHGISKKDA INNILFVLGF NAFGGFSVFL
301: PFLVAKVGDA ADAAGLRPRL RDEVRRAMDK AKDADAEFGF AAVRESMPLV RSTVYEMLRM QPPVPLQFGR ARRDFVLQSH GGAAYQVSKG EVLCGYQPLA
401: MRDPEVFDRP EEFVPERFLG DDGARLLQHL FWSNGPETEQ PAPGNKQCAA KEVVVDTACM LLAELFRRYD DFVVEGTSFT KLVKRQPSPS LSPAAAAGAG
501: AQQ
Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)
001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK
Arabidopsis Description
CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.