Factsheet for Bra012788.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90591	Canola	plastid	99.18	99.18
CDY09763	Canola	cytosol, plastid	76.28	97.14
AT4G15440.1	Thale cress	cytosol	61.55	78.39
KRH26745	Soybean	plastid	60.74	62.66
Solyc07g049690.2.1	Tomato	plastid	57.26	58.82
PGSC0003DMT400002779	Potato	plastid	56.85	57.92
VIT_12s0059g01060.t01	Wine grape	plastid	57.67	57.91
GSMUA_Achr6P13520_001	Banana	plastid	51.94	54.98
Os02t0110200-01	Rice	plastid	49.28	49.49
TraesCS6A01G027900.1	Wheat	plastid	46.83	47.31
TraesCS6B01G039500.1	Wheat	plastid	46.42	47.19
TraesCS6D01G031100.2	Wheat	plastid	46.42	47.19
Zm00001d054067_P001	Maize	plasma membrane	47.24	46.02
OQU84187	Sorghum	plastid	46.01	44.73
HORVU6Hr1G005250.1	Barley	plastid	46.63	41.68
Bra035320.1-P	Field mustard	plastid	39.88	36.86

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	EnsemblPlantsGene:Bra012788	EnsemblPlants:Bra012788.1	EnsemblPlants:Bra012788.1-P	InterPro:Cyt_P450
InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536	GO:GO:0009611	GO:GO:0009941
GO:GO:0009987	GO:GO:0010597	GO:GO:0016705	GO:GO:0016829	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M4D8H8	PFAM:PF00067	PRINTS:PR00465	PANTHER:PTHR24286
PANTHER:PTHR24286:SF49	SUPFAM:SSF48264	UniParc:UPI00025407D5	SEG:seg	:	:

Description

AT4G15440 (E=8e-180) HPL1, CYP74B2 | HPL1 (HYDROPEROXIDE LYASE 1); electron carrier/ heme binding / iron ion binding / monooxygenase

Coordinates

chrA03:+:22266055..22270112

Molecular Weight (calculated)

54546.3 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.147

Length

489 amino acids

Sequence
(BLAST)

001: MASASLPPPP PSSTSLTSQQ SSPPPSQLPI RKMPGSYGLP LVGPLSDRLD YFWFQGPDKF FKSRSEKYKS TVFRTNIPPS FPFLGNVNPN IVAVLDVKSF
101: SYLFDMDLVD KRDVLIGDFR PSLDFYGGIR VGVYLDTTEP KHAKAKSFAM EILKRSSEVW LRELLSNLDT FWETVESDIS KNDDGASYII GLQRCIFNFL
201: STALTGANPS VSPDIAENGW KMLDKWLAIQ VIPTTKIGIL QPLEEIFLHS WAYPFFLVAG DYQKLYNFIS ENAGDVIRLG DEEYGLTRDE TVHNLLFVMG
301: FNAYGGFSVF LPSLIGRIAG DTSGLQERLR TEVRKVCGSG SGLNFRTVNE MELVKSVVYE TLRLNPPVPL QYARARDNFK ISSHDAVYEV KKGELLCGYQ
401: PLVMRDANIF EDPEEFKPDR FVGQTGSKLL NYLFWSNGPQ TGTPSVSNKQ CAAKDMVTIT AALIIANLFL RYDKITGDAG SIKTVVKAT

Best Arabidopsis Sequence Match ( AT4G15440.1 )
(BLAST)

001: MDLVDKRDVL IGDFRPSLGF YGGVRVGVYL DTTEPKHAKI KGFAMETLKR SSKVWLQELR SNLNIFWGTI ESEISKNGAA SYIFPLQRCI FSFLCASLAG
101: VDASVSPDIA ENGWKTINTW LALQVIPTAK LGVVPQPLEE ILLHTWPYPS LLIAGNYKKL YNFIDENAGD CLRLGQEEFG LTRDEAIQNL LFVLGFNAYG
201: GFSVFLPSLI GRITGDNSGL QERIRTEVRR VCGSGSDLNF KTVNEMELVK SVVYETLRFS PPVPLQFARA RKDFQISSHD AVFEVKKGEL LCGYQPLVMR
301: DANVFDEPEE FKPDRYVGET GSELLNYLYW SNGPQTGTPS ASNKQCAAKD IVTLTASLLV ADLFLRYDTI TGDSGSIKAV VKAK

Arabidopsis Description

CYP74B2Probable inactive linolenate hydroperoxide lyase [Source:UniProtKB/Swiss-Prot;Acc:B3LF83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.