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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • golgi 2
  • nucleus 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g009990.2.1
Solyc01g080540.2.1
Solyc01g107650.2.1
Solyc02g063150.2.1
Solyc02g085950.2.1
Solyc03g034220.2.1
Solyc03g113220.2.1
Solyc04g005270.1.1
Solyc04g009440.2.1
Solyc04g074550.2.1
Solyc04g079730.1.1
Solyc05g010810.1.1
Solyc05g015610.2.1
Solyc06g034380.1.1
Solyc06g051120.2.1
Solyc06g071050.2.1
Solyc06g073310.2.1
Solyc06g083620.2.1
Solyc06g084410.2.1
Solyc07g047770.2.1
Solyc07g053650.2.1
Solyc07g061790.2.1
Solyc07g061800.2.1
Solyc07g062840.2.1
Solyc07g064150.2.1
Solyc08g014550.2.1
Solyc08g075650.2.1
Solyc08g075670.1.1
Solyc09g008970.1.1
Solyc09g008980.1.1
Solyc09g009210.2.1
Solyc09g056160.2.1
Solyc10g006470.2.1
Solyc10g008180.1.1
Solyc10g083520.1.1
Solyc11g005910.1.1
Solyc11g008580.1.1
Solyc11g069800.1.1
Solyc12g017290.1.1
Solyc12g049580.1.1
Solyc12g057120.1.1
Solyc12g096700.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G35750.1 Solyc07g061790.2.1 AT1G17100.1 18642946
AT5G35750.1 Solyc07g061800.2.1 AT1G17100.1 18642946
AT5G35750.1 Solyc04g074550.2.1 AT1G22450.1 18642946
AT5G35750.1 Solyc12g057120.1.1 AT1G22450.1 18642946
AT5G35750.1 Solyc04g005270.1.1 AT1G26270.1 18642946
AT5G35750.1 Solyc05g010810.1.1 AT1G26270.1 18642946
AT5G35750.1 Solyc05g015610.2.1 AT1G27320.1 16965536
AT5G35750.1 Solyc08g075650.2.1 AT1G31810.1 18642946
AT5G35750.1 Solyc08g075670.1.1 AT1G31810.1 18642946
AT5G35750.1 Solyc06g034380.1.1 AT1G33120.1 18642946
AT5G35750.1 Solyc06g073310.2.1 AT1G33120.1 18642946
AT5G35750.1 Solyc08g014550.2.1 AT1G33120.1 18642946
AT5G35750.1 Solyc12g017290.1.1 AT1G33120.1 18642946
AT5G35750.1 Solyc12g096700.1.1 AT1G33120.1 18642946
AT5G35750.1 Solyc06g034380.1.1 AT1G33140.1 18642946
AT5G35750.1 Solyc06g073310.2.1 AT1G33140.1 18642946
AT5G35750.1 Solyc08g014550.2.1 AT1G33140.1 18642946
AT5G35750.1 Solyc12g017290.1.1 AT1G33140.1 18642946
AT5G35750.1 Solyc12g096700.1.1 AT1G33140.1 18642946
AT5G35750.1 Solyc12g049580.1.1 AT1G53880.1 18642946
AT5G35750.1 Solyc11g008580.1.1 AT1G65430.1 18642946
AT5G35750.1 Solyc02g063150.2.1 AT1G67090.1 18642946
AT5G35750.1 Solyc02g085950.2.1 AT1G67090.1 18642946
AT5G35750.1 Solyc03g034220.2.1 AT1G67090.1 18642946
AT5G35750.1 Solyc01g107650.2.1 AT2G15300.1 18642946
AT5G35750.1 Solyc07g053650.2.1 AT2G20580.1 18642946
AT5G35750.1 Solyc10g008180.1.1 AT2G20580.1 18642946
AT5G35750.1 Solyc09g008970.1.1 AT3G10020.1 18642946
AT5G35750.1 Solyc09g008980.1.1 AT3G10020.1 18642946
AT5G35750.1 Solyc06g051120.2.1 AT3G11100.1 18642946
AT5G35750.1 Solyc01g080540.2.1 AT3G21510.1 16965536
AT5G35750.1 Solyc06g084410.2.1 AT3G29350.1 16965536
AT5G35750.1 Solyc06g084410.2.1 AT3G29350.1 18642946
AT5G35750.1 Solyc09g009210.2.1 AT3G52920.1 18642946
AT5G35750.1 Solyc10g083520.1.1 AT3G52920.1 18642946
AT5G35750.1 Solyc07g064150.2.1 AT4G27130.1 18642946
AT5G35750.1 Solyc10g006470.2.1 AT4G27130.1 18642946
AT5G35750.1 Solyc06g083620.2.1 AT4G29040.1 18642946
AT5G35750.1 Solyc04g009440.2.1 AT5G08790.1 18642946
AT5G35750.1 Solyc01g009990.2.1 AT5G13120.1 18642946
AT5G35750.1 Solyc07g047770.2.1 AT5G35750.1 16965536
AT5G35750.1 Solyc04g079730.1.1 AT5G42650.1 18642946
AT5G35750.1 Solyc11g069800.1.1 AT5G42650.1 18642946
AT5G35750.1 Solyc09g056160.2.1 AT5G48470.1 18642946
AT5G35750.1 Solyc07g062840.2.1 AT5G53950.1 18642946
AT5G35750.1 Solyc03g113220.2.1 AT5G62740.1 18642946
AT5G35750.1 Solyc06g071050.2.1 AT5G62740.1 18642946
AT5G35750.1 Solyc11g005910.1.1 AT5G64070.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400015729 Potato cytosol 27.85 93.48
VIT_12s0057g00690.t01 Wine grape endoplasmic reticulum, golgi 68.5 66.51
GSMUA_Achr4P17470_001 Banana cytosol 41.7 66.45
GSMUA_AchrUn_... Banana cytosol 48.58 63.03
Bra035381.1-P Field mustard cytosol, golgi, plasma membrane 56.03 60.23
CDX74635 Canola cytosol, golgi, plasma membrane 56.03 60.23
Bra013186.1-P Field mustard plasma membrane 53.44 60.16
CDX93074 Canola plasma membrane 53.36 60.07
CDY50037 Canola endoplasmic reticulum, golgi, plasma membrane 53.44 60.05
CDY47297 Canola plasma membrane 55.79 59.97
Zm00001d014297_P006 Maize cytosol 45.67 59.94
KRH74010 Soybean mitochondrion, plasma membrane 59.03 59.71
KRH14106 Soybean mitochondrion 59.19 59.67
AT5G35750.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 56.03 58.84
GSMUA_Achr1P22740_001 Banana cytosol 36.76 55.77
Solyc05g015610.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 45.67 54.65
Solyc04g008110.2.1 Tomato plasma membrane 42.67 53.07
Os10t0362300-03 Rice extracellular 49.47 51.47
Solyc02g083670.2.1 Tomato cytosol 2.35 38.67
Solyc12g038690.1.1 Tomato cytosol 1.54 29.69
Solyc09g065310.1.1 Tomato cytosol 1.54 29.69
Solyc12g062760.1.1 Tomato cytosol 1.78 25.0
Solyc06g051610.1.1 Tomato cytosol 3.32 24.7
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 2.19 24.55
Solyc09g011680.1.1 Tomato cytosol 1.94 23.08
Solyc04g025660.1.1 Tomato cytosol 1.94 23.08
Solyc09g082910.1.1 Tomato cytosol 3.08 22.89
Solyc12g011330.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 13.52 22.15
Solyc07g056580.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 13.12 22.01
Solyc12g044870.1.1 Tomato cytosol 2.91 21.69
Solyc04g064840.1.1 Tomato endoplasmic reticulum 3.0 20.44
Solyc12g027610.1.1 Tomato cytosol 3.16 20.0
Solyc09g075440.2.1 Tomato plasma membrane 10.28 20.0
Solyc04g049990.1.1 Tomato cytosol 2.11 19.85
Solyc06g053710.2.1 Tomato plasma membrane 12.15 19.71
Solyc08g068960.2.1 Tomato cytosol 16.11 19.55
Solyc12g099720.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 11.66 19.46
Solyc01g014770.1.1 Tomato cytosol 2.11 19.4
Solyc11g006180.1.1 Tomato plasma membrane 11.5 18.51
Solyc08g068360.1.1 Tomato cytosol 1.78 18.33
Solyc06g036450.1.1 Tomato cytosol 1.46 18.0
Solyc05g055070.2.1 Tomato plasma membrane 10.77 17.85
Solyc11g065590.1.1 Tomato cytosol 1.3 17.78
Solyc02g083680.1.1 Tomato plastid 12.55 17.63
Solyc09g089610.2.1 Tomato endoplasmic reticulum 10.69 17.51
Protein Annotations
Gene3D:1.10.287.130MapMan:11.4.2.1Gene3D:3.30.450.350Gene3D:3.40.50.2300InterPro:CHASE_domInterPro:CheY-like_superfamily
ncoils:CoilGO:GO:0000003GO:GO:0000155GO:GO:0000160GO:GO:0003674GO:GO:0003824
GO:GO:0004673GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006464GO:GO:0006810GO:GO:0006950GO:GO:0006970GO:GO:0007154
GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009414
GO:GO:0009628GO:GO:0009636GO:GO:0009651GO:GO:0009719GO:GO:0009737GO:GO:0009791
GO:GO:0009908GO:GO:0009909GO:GO:0009987GO:GO:0010029GO:GO:0010087GO:GO:0010271
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016772
GO:GO:0018106GO:GO:0019538GO:GO:0019900GO:GO:0023014GO:GO:0034757GO:GO:0038023
GO:GO:0040007GO:GO:0042802GO:GO:0043424GO:GO:0048509GO:GO:0048831GO:GO:0070417
GO:GO:0071215GO:GO:0080117InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sf
InterPro:His_kinase_domInterPro:IPR001789InterPro:IPR005467InterPro:IPR006189InterPro:IPR036890UniProt:K4CEY3
PFAM:PF00072PFAM:PF00512PFAM:PF02518PFAM:PF03924PRINTS:PR00344PFscan:PS50109
PFscan:PS50110PFscan:PS50839PANTHER:PTHR43719PANTHER:PTHR43719:SF16SMART:SM00387SMART:SM00388
SMART:SM00448SMART:SM01079SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55874InterPro:Sig_transdc_His_kin-like_C
InterPro:Sig_transdc_resp-reg_receiverEnsemblPlantsGene:Solyc07g047770.2EnsemblPlants:Solyc07g047770.2.1TMHMM:TMhelixUniParc:UPI000276AE41SEG:seg
Description
Histidine kinase 2 [Source:Projected from Arabidopsis thaliana (AT5G35750) UniProtKB/Swiss-Prot;Acc:Q9C5U2]
Coordinates
chr7:-:58960694..58970927
Molecular Weight (calculated)
138521.0 Da
IEP (calculated)
6.601
GRAVY (calculated)
-0.178
Length
1235 amino acids
Sequence
(BLAST)
0001: MSLNCKLLGM NGSFSSSFRL KKARESLPGP SCGWKWQRKL LFLWLIFFGI GFFWLVISLN GDVYSWKKEA SELNEDKSYF LLERFNVSKE QIQDLATLFF
0101: EKDQISSLEC SKVHKHEMPM STTITCLLKV LGSESLEYEQ HEMVVDNIEA EGQCPVPDEE TLKNSDISLD EKSLPFVLHR LSSLISTDPK FFEKKASQIR
0201: EVGNFNPEHC DSIAFCFTKL CWWVLLGIVI SWKILLLCAK GGEHQQNGFI QQQPLSQQLH PLQQLQQQQV QISCRTGGKW RKKALVIFVF GGVTLAIWLY
0301: LYLSADIALR RKETLTSMCD ERARMLQDQF NVSMNHVHAL AILVSTFHHG KQPSAIDQKT FEEYTERTAF ERPLTSGVAY ALRVRHSERE EFEKLHGWTI
0401: KKMEAEDQTL GHDYIPANLD PAPDQDEYAP VIFSQQTVSH IVSIDMMSGK EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYNT HLLPYATPVD
0501: RINATVGYIG ASYDVPSLVE KLLQQLASKQ TIVVNVYDTT NKFAPIKMYG MDENDTGLLH VSNLDFGDPA RSHEMHCRFK QKPSPPWTAI TLSVGVLVIT
0601: LLIGHIFHAA INRIAEVEGQ YQEMMELKHR AEAADIAKSQ FLATVSHEIR TPMNGVLGML QMLMDTNLDL TQLDYAQTAL SSGNELISLI NEVLDQAKIE
0701: SGRLELEAVP FDLRAELDNV SSLFSGKSHK KGIELAVYVS DLVPEVVIGD SGRFKQIITN LVGNSVKFTN DKGHIFVTVH LADEVRNPHD VTDEVLKQSL
0801: TFVQERSNAS WNTFSGFPVV DRWQSWQKFD RLSSTEEEVG KIKLLVTIED TGVGIPLEAQ ARIFTPFMQA DSSTSRTYGG TGIGLSISKR LVDLMGGEIG
0901: FFSEPGRGST FSFTAAFTRG EEGSLERKWK QYDPAFPEFR GLRALVVDDK SIRAVVTRYH LQRLGICVNI TSTMRSACSY LSNYSNTSSL EHLAVVFVDQ
1001: DSWDKETSLA LSNMLKEVRP NGSTTTLGKP PKICLLCMNF MERAELKIAG IVDHVLTKPV RLSALITCVQ EAIGCQNKKQ VTQPTTLGSL LTGKHILVVD
1101: DNNVNRRVAE GALKKYGAIV TCVDSGKAAL THLNPPHKFD ACFMDLQMPE MDGFEATRQI RNLENKYNEK VNSGELFSGM SARVAHWHTP ILAMTADVIQ
1201: ATNEECVKCG MDDYVSKPFE KGQLYSTVAR FFGSG
Best Arabidopsis Sequence Match ( AT5G35750.1 )
(BLAST)
0001: MSITCELLNL TSKKAKKSSS SDKKWLKKPL FFLILCGSLV IVLVMFLRLG RSQKEETDSC NGEEKVLYRH QNVTRSEIHD LVSLFSDSDQ VTSFECHKES
0101: SPGMWTNYGI TCSLSVRSDK QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL ILGVLVCHKI YVSHSKARGE
0201: RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG
0301: KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE
0401: EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ TIAVDVYDTT NTSGLIKMYG
0501: SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR
0601: TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD
0701: PSRFRQIITN LVGNSIKFTQ ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY STESQNSDQI KLLVTVEDTG
0801: VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI
0901: RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL
1001: RMSVLICCLQ ETLVNGKKRQ PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF DACFMDLQMP EMDGFEATRR
1101: VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC
Arabidopsis Description
AHK2Histidine kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U2]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.