Factsheet for Solyc05g010810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g047770.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26270.1	Solyc07g047770.2.1	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050546	Potato	cytosol	96.25	98.09
Solyc04g005270.1.1	Tomato	cytosol	82.66	82.66
VIT_01s0010g00600.t01	Wine grape	cytosol	79.84	81.37
KRH75169	Soybean	cytosol	74.38	74.49
CDY48067	Canola	cytosol	71.25	74.03
KRH71011	Soybean	cytosol	74.06	73.72
CDX83526	Canola	cytosol	70.62	73.5
AT2G03890.1	Thale cress	cytosol	74.06	72.92
Bra025140.1-P	Field mustard	cytosol	66.09	72.31
CDY16149	Canola	cytosol, mitochondrion, plastid	67.97	71.55
Bra011020.1-P	Field mustard	cytosol	69.06	71.52
CDY36079	Canola	cytosol	69.06	71.52
AT1G26270.1	Thale cress	cytosol	70.0	71.11
Bra024724.1-P	Field mustard	plastid	68.75	70.97
CDY34563	Canola	cytosol	68.44	70.87
AT1G13640.1	Thale cress	cytosol	68.12	70.1
CDX85013	Canola	mitochondrion	67.97	70.05
CDY56175	Canola	cytosol	65.16	68.25
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	61.72	65.29
EES13055	Sorghum	plastid	61.09	62.56
Zm00001d026559_P001	Maize	plastid	60.62	62.48
TraesCS2B01G570500.1	Wheat	peroxisome	60.0	62.14
TraesCS2D01G541800.1	Wheat	peroxisome	60.16	61.21
TraesCS2A01G540100.1	Wheat	peroxisome	60.16	60.92
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	59.38	59.1
Solyc10g078170.1.1	Tomato	cytosol, plastid	37.19	42.05
Solyc05g050590.2.1	Tomato	endoplasmic reticulum	26.25	29.58
Solyc03g083350.2.1	Tomato	cytosol	26.72	29.48
Solyc01g095990.2.1	Tomato	cytosol	26.25	29.42
Solyc08g082480.2.1	Tomato	cytosol	23.91	26.24

Protein Annotations

EnsemblPlants:Solyc05g010810.1.1	EnsemblPlantsGene:Solyc05g010810.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000403	InterPro:PI3/4_kinase_cat_dom
PANTHER:PTHR15245	PANTHER:PTHR15245:SF37	PFAM:PF00454	SEG:seg	UniParc:UPI00027671ED	UniProt:K4BXQ3
MapMan:27.5.2.3	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:4987801..4989723

Molecular Weight (calculated)

71171.5 Da

IEP (calculated)

5.369

GRAVY (calculated)

-0.387

Length

640 amino acids

Sequence
(BLAST)

001: MSPNLDSPVQ TQMAVAVFKS PLGGEYHGSS RMEGKSTGRR RVFVQTDTGC VLGMELDRSD NAHTVKRRLQ IALNVPTEES SLTFGDVVLK NDLSAIRNDS
101: PLLLTRNFMH RSSSTPCLSP TGRDVQQRDQ SGPIEILGNS SHFAKTKQLV KEIVKAVKIG VDPLPVHSGL GGAYYFRNSR GESVAIVKPT DEEPFAPNNP
201: KGFVGKALGQ PGLKRSVRVG ETGFREVAAY LLDYDHFANV PATALVKITH SIFNINDGVN GDKPFSKKKL VSKIASLQQF IPHDFDASDH GTSSFPVAAV
301: HRIGILDIRI FNTDRHAGNL LVRKLDGVGM FGQVELIPID HGLCLPETLE DPYFEWIHWP QASIPFSDDE LKYIEKLDPV RDSDMLKSEL PMIREACLRV
401: LVLSTIFLKE AAAYGLCLAE IGEMMSREFR RGEEEPSELE VVCLEARRLI AEREILSPKA EVDEEEFQFD IDYEEAGYGS SPKMASEDFV SRNPFQFPFG
501: GGNGRTQLFK LDESIEEEES EEEEDTSVNC VPAPAKNVEE LKLSMSLKNI SLGDKNQKHP YFSGTKPENA HLANSSSGHR SANEQLPVSS SFVKLADMGE
601: EEWRLFLEKF QELLYPAFAK RKSVALGQRQ IQRLGTSCQF

Best Arabidopsis Sequence Match ( AT2G03890.1 )
(BLAST)

001: MSRNLDSPVQ TQMAVAVFKT PLTGASKMEG KQHHKHQHLQ RQSSGRRVFV QTETGCVLGM ELDRSDNVHT VKRRLQIALN FPTEESSLTY GDMVLTNDLS
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF

Arabidopsis Description

PI4KG7UBDK GAMMA 7 [Source:UniProtKB/TrEMBL;Acc:A0A178VP74]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.