Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • nucleus 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400031664 Potato cytosol 97.43 97.43
VIT_02s0025g01610.t01 Wine grape plastid 65.69 65.69
KRH77661 Soybean nucleus 60.21 61.69
KRH60051 Soybean cytosol 60.03 61.62
KRH41324 Soybean cytosol 59.69 61.16
Solyc01g095990.2.1 Tomato cytosol 59.18 60.42
KRH27827 Soybean extracellular 15.95 59.24
Solyc05g050590.2.1 Tomato endoplasmic reticulum 57.29 58.8
Solyc03g083350.2.1 Tomato cytosol 56.78 57.07
Solyc05g010810.1.1 Tomato extracellular 26.24 23.91
Solyc04g005270.1.1 Tomato cytosol 25.73 23.44
Solyc10g078170.1.1 Tomato cytosol, plastid 22.64 23.32
Protein Annotations
MapMan:27.5.2.3Gene3D:3.10.20.90GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
InterPro:IPR000403InterPro:IPR000626UniProt:K4CPP4InterPro:Kinase-like_dom_sfPFAM:PF00240PFAM:PF00454
InterPro:PI3/4_kinase_cat_domPFscan:PS50053PANTHER:PTHR10666PANTHER:PTHR10666:SF134SMART:SM00213SUPFAM:SSF54236
SUPFAM:SSF56112EnsemblPlantsGene:Solyc08g082480.2EnsemblPlants:Solyc08g082480.2.1UniParc:UPI000276C6C0InterPro:Ubiquitin-like_domsfInterPro:Ubiquitin_dom
Description
No Description!
Coordinates
chr8:-:65265860..65268624
Molecular Weight (calculated)
65287.4 Da
IEP (calculated)
5.111
GRAVY (calculated)
-0.256
Length
583 amino acids
Sequence
(BLAST)
001: MSAVDVALSP VQEESVRATR HIYGPLPLCT NESIVIYITV AGSVIPMRVL ESDSIGEVKL KLQTCKGFVV KMQKLVFGGR ELARNESLVR DYGVSNGNVL
101: HMVFKISDLL VITVRTTCGM EFEFPVDRHQ DIGYLKRTIL KKGKDFGEEL KVQELFCNGE KLEDQKLIDD ITADAVIHLV VQKFAKLRAK HAERDVELSV
201: VAANWHEETQ SQGEHEPSRE LQSFSKKTPD TNLVLEPFVV DPNVELPGYI WDMINSACDG LTKGNIPIRS SEGTGGTYFM QDGSGNKYVA IFKPIDEEPL
301: AVNNPQGLPL STNGEGLKRG TRVGEGAFRE VAAFLLDHPR TGQRTLSNCE IGFSGVPPTV MVQCLHNTFH HPDGFEWSSE YTKIGSLQLF MKNEGNCEDM
401: GPGIFPVEEV HKITVFDIRT ANADRHAGNI LVSREGKEGR IVLTPIDHGY CLPENFEDCT FDWLYWPQAR KPYSPETIKY IKSLDAEQDI GLLKFYGLDL
501: SVECARTLRI STMLLKKGVE TGLTPFDIGN MMCRETLNKE SVIEEIIRDA EDSMLPGMTE ATFLETVYKL MDIKLEKLKY KSS
Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)
001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH
Arabidopsis Description
PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.