Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g082480.2.1 | Tomato | cytosol | 97.43 | 97.43 |
| VIT_02s0025g01610.t01 | Wine grape | plastid | 65.69 | 65.69 |
| KRH60051 | Soybean | cytosol | 60.21 | 61.8 |
| KRH77661 | Soybean | nucleus | 60.03 | 61.51 |
| KRH41324 | Soybean | cytosol | 59.86 | 61.34 |
| PGSC0003DMT400000336 | Potato | cytosol | 59.52 | 60.77 |
| KRH27827 | Soybean | extracellular | 15.95 | 59.24 |
| PGSC0003DMT400018139 | Potato | endoplasmic reticulum | 57.46 | 58.98 |
| PGSC0003DMT400023562 | Potato | cytosol | 57.63 | 57.93 |
| PGSC0003DMT400050546 | Potato | cytosol | 25.9 | 24.04 |
| PGSC0003DMT400018507 | Potato | cytosol, plastid | 22.81 | 23.5 |
| PGSC0003DMT400004869 | Potato | cytosol | 25.04 | 23.29 |
Protein Annotations
| EntrezGene:102581038 | MapMan:27.5.2.3 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | InterPro:IPR000403 | InterPro:IPR000626 | InterPro:Kinase-like_dom_sf | UniProt:M1AW05 | PFAM:PF00240 |
| PFAM:PF00454 | EnsemblPlantsGene:PGSC0003DMG400012141 | PGSC:PGSC0003DMG400012141 | EnsemblPlants:PGSC0003DMT400031664 | InterPro:PI3/4_kinase_cat_dom | PFscan:PS50053 |
| PANTHER:PTHR10666 | PANTHER:PTHR10666:SF134 | SMART:SM00213 | SUPFAM:SSF54236 | SUPFAM:SSF56112 | UniParc:UPI0002948644 |
| InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | RefSeq:XP_006343840.1 | : | : | : |
Description
Ubiquitin [Source:PGSC_GENE;Acc:PGSC0003DMG400012141]
Coordinates
chr8:-:56075339..56078804
Molecular Weight (calculated)
65358.6 Da
IEP (calculated)
5.341
GRAVY (calculated)
-0.248
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAVDVALSP VQEESVRATR HIYGPLALCT NESIVIYITV AGSVIPMRVL ESDSIGEVKL KLQTCKGFVV KMQKLVFGGR ELARNESLVR DYGVSNGNVL
101: HMVFKISDLL VITVRTTCGM EFEFPVDRHQ DIGYLKRTIL KKGKDFGEEL KVQELFCNGE KLEDQKLIDD ITADAVIHLV IQKFAKLRAK HAERDVELSV
201: VAANWNEETQ SQGVHEPSRE FQSFSKKAPD RNLLLEPFVV DPNIELPGYI WDMINSACDG LTKGNIPIRS SEGTGGTYFM QDGSGNKYVA IFKPIDEEPL
301: AVNNPQGLPL STNGEGLKRG TRVGEGAFRE VAAFLLDHPR TGHRTLSNCE IGFSGVPPTV MVQCLHNTFH HPDGFEWSSE YTKVGSLQLF MKNEGNCEDM
401: GPGIFPVEEV HKITVFDIRT ANADRHAGNI LVSREGKEGR IVLTPIDHGY CLPENFEDCT FDWLYWPQAR KPYSPETIKY IKSLDAEQDI DLLKFYGLDL
501: SVECARTLRI STMLLKKGVE KGLAPFDIGN MMCRETLNKE SVIEEIIRDA QDSMLPGMTE ATFLETVYKL MDIKLEKLKY KSS
101: HMVFKISDLL VITVRTTCGM EFEFPVDRHQ DIGYLKRTIL KKGKDFGEEL KVQELFCNGE KLEDQKLIDD ITADAVIHLV IQKFAKLRAK HAERDVELSV
201: VAANWNEETQ SQGVHEPSRE FQSFSKKAPD RNLLLEPFVV DPNIELPGYI WDMINSACDG LTKGNIPIRS SEGTGGTYFM QDGSGNKYVA IFKPIDEEPL
301: AVNNPQGLPL STNGEGLKRG TRVGEGAFRE VAAFLLDHPR TGHRTLSNCE IGFSGVPPTV MVQCLHNTFH HPDGFEWSSE YTKVGSLQLF MKNEGNCEDM
401: GPGIFPVEEV HKITVFDIRT ANADRHAGNI LVSREGKEGR IVLTPIDHGY CLPENFEDCT FDWLYWPQAR KPYSPETIKY IKSLDAEQDI DLLKFYGLDL
501: SVECARTLRI STMLLKKGVE KGLAPFDIGN MMCRETLNKE SVIEEIIRDA QDSMLPGMTE ATFLETVYKL MDIKLEKLKY KSS
001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH
Arabidopsis Description
PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.