Factsheet for VIT_02s0025g01610.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60051	Soybean	cytosol	68.27	70.07
KRH41324	Soybean	cytosol	67.41	69.07
KRH77661	Soybean	nucleus	67.07	68.72
VIT_16s0098g01890.t01	Wine grape	cytosol	66.9	66.67
PGSC0003DMT400031664	Potato	cytosol	65.69	65.69
Solyc08g082480.2.1	Tomato	cytosol	65.69	65.69
VIT_15s0046g00440.t01	Wine grape	plastid	62.44	63.19
KRH27827	Soybean	extracellular	16.3	60.51
VIT_12s0059g00850.t01	Wine grape	cytosol	8.58	55.56
VIT_10s0071g00170.t01	Wine grape	cytosol, extracellular	12.18	55.47
VIT_10s0071g00180.t01	Wine grape	extracellular	10.63	55.36
VIT_01s0010g00600.t01	Wine grape	cytosol	27.44	25.48
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	24.53	25.4
VIT_17s0000g04780.t01	Wine grape	cytosol	27.27	25.28
VIT_14s0083g00880.t01	Wine grape	cytosol	26.42	24.76

Protein Annotations

EntrezGene:100249570	wikigene:100249570	MapMan:27.5.2.3	Gene3D:3.10.20.90	EMBL:AM484370	ProteinID:CAN83998
ProteinID:CAN83998.1	ProteinID:CCB58251	ProteinID:CCB58251.1	UniProt:F6HU28	EMBL:FN596251	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000403	InterPro:IPR000626	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100249570	wikigene:LOC100249570	PFAM:PF00240	PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom	PFscan:PS50053
PANTHER:PTHR10666	PANTHER:PTHR10666:SF134	SMART:SM00213	SUPFAM:SSF54236	SUPFAM:SSF56112	TIGR:TC59909
UniParc:UPI0001982BEB	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	ArrayExpress:VIT_02s0025g01610	EnsemblPlantsGene:VIT_02s0025g01610	EnsemblPlants:VIT_02s0025g01610.t01
unigene:Vvi.12215	RefSeq:XP_002268042	RefSeq:XP_002268042.1	RefSeq:XP_010659397.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:-:1560083..1563233

Molecular Weight (calculated)

64777.5 Da

IEP (calculated)

4.926

GRAVY (calculated)

-0.204

Length

583 amino acids

Sequence
(BLAST)

001: MSVAAVASSP IRGESVHSPG FFHGQPEPCS SESILVYLTV AGSVIPLRVL ESDSIASVKF RIQICQGFVV KKQKLVFGGR ELARNDSLVR DYGVTSGNVL
101: HLVLKLSDLL AITVRTACGK EFEFHVDRYS NVGYLKQRIV KTRKCFVDLE DHEFFCNGNK LDDQVLIDDI CTSDPIIHLL VQKSAKVRAK PVDKDFELSV
201: VAEDRNEGTR DGANEGENRS EEQLQVVEKE PPDRDFWLEP IIVNPKLKFP SFIWDLINST FDGLDSGNHP ILSSEGTGGT YFMQDSLGLK YVSVFKPMDE
301: EPMAVNNPRG LPASSNGEGL KRGTRVGEGA VREVAAYVLD HPKSGPRLFS DEEIGFAGVP PTVMVQCLHK GLNHPEGYEC SEEKVKIGSL QKFMNSHGSC
401: EDMGPGAFPV EEVHKISVFD IRMANTDRHA GNILVNKEGK DGQIVLIPID HGYCLPENFE DCTFDWLYWP QARQPFSLDT IDYINSLDAE QDIALLKFCG
501: WELSLECART LRISTMLLKK GAQRGLTPFV IGSIMCRVTL NKESVIEEIV QEAQDSLLPG MSEAAFLETI SQLIDTRLDK LMK

Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.