Factsheet for VIT_10s0071g00170.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g00850.t01	Wine grape	cytosol	60.94	86.67
VIT_10s0071g00180.t01	Wine grape	extracellular	67.19	76.79
VIT_15s0046g00440.t01	Wine grape	plastid	79.69	17.71
VIT_02s0025g01610.t01	Wine grape	plastid	55.47	12.18
VIT_16s0098g01890.t01	Wine grape	cytosol	54.69	11.97
Bra033288.1-P	Field mustard	cytosol	12.5	2.77
VIT_17s0000g04780.t01	Wine grape	cytosol	10.94	2.23
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	9.38	2.13
VIT_14s0083g00880.t01	Wine grape	cytosol	10.16	2.09
VIT_01s0010g00600.t01	Wine grape	cytosol	10.16	2.07
Bra033320.1-P	Field mustard	cytosol	3.91	1.61
CDX89977	Canola	cytosol	3.91	1.61
CDX90007	Canola	cytosol	0.78	0.44

Protein Annotations

EntrezGene:100261694	wikigene:100261694	Gene3D:3.10.20.90	MapMan:35.1	ProteinID:CCB58891	ProteinID:CCB58891.1
UniProt:F6HW27	EMBL:FN596260	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626
EntrezGene:LOC100261694	wikigene:LOC100261694	PFAM:PF00240	PANTHER:PTHR10666	PANTHER:PTHR10666:SF180	SUPFAM:SSF54236
UniParc:UPI0002109F47	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	ArrayExpress:VIT_10s0071g00170	EnsemblPlantsGene:VIT_10s0071g00170	EnsemblPlants:VIT_10s0071g00170.t01
RefSeq:XP_003633075	RefSeq:XP_003633075.1	:	:	:	:

Description

No Description!

Coordinates

chr10:+:16341693..16342361

Molecular Weight (calculated)

14532.9 Da

IEP (calculated)

8.889

GRAVY (calculated)

-0.039

Length

128 amino acids

Sequence
(BLAST)

001: MIPMRVMGFI SIEVVKLRVQ NCRGFVVKKQ KLVCGNRELA RSNSFVQDYG VSNGNVFHIV LKLSNLQIIN VRTAYGEEYT FHVERSKDVG YVKQQVAKKG
101: KGLVDVEDQE IVCDGKWVDG KWVCCCCI

Best Arabidopsis Sequence Match ( AT2G46500.3 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPTWWEHFDD
401: QGRKREARFG SYRPWILLA

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.