CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033320.1-P	Field mustard	cytosol	100.0	100.0
CDX90007	Canola	cytosol	22.83	31.56
CDX83360	Canola	cytosol	22.19	21.97
CDX87135	Canola	cytosol	29.9	19.96
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.26	19.53
CDY46532	Canola	cytosol	28.3	19.05
CDY64881	Canola	cytosol	29.26	18.5
CDY47844	Canola	plastid	29.26	17.43
CDY27320	Canola	cytosol	27.33	17.38
CDY08380	Canola	cytosol	28.94	17.27
CDX95703	Canola	cytosol	26.69	16.73
CDX80424	Canola	cytosol	30.55	16.55
CDX88085	Canola	cytosol	30.23	16.38
CDY06957	Canola	cytosol, peroxisome, plastid	25.72	16.29
CDY66313	Canola	cytosol	28.3	15.97
CDY14747	Canola	cytosol, peroxisome, plastid	25.08	15.89
CDY22484	Canola	cytosol, extracellular, vacuole	24.76	14.56
CDY35435	Canola	cytosol, extracellular, vacuole	24.76	14.56
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	25.72	14.23
CDY16149	Canola	cytosol, mitochondrion, plastid	27.33	13.98
CDY36079	Canola	cytosol	27.33	13.75
CDY34563	Canola	cytosol	27.01	13.59
CDX85013	Canola	mitochondrion	27.01	13.53
CDY56175	Canola	cytosol	24.76	12.6
CDX83526	Canola	cytosol	24.44	12.36
CDY48067	Canola	cytosol	24.12	12.18
CDY27202	Canola	plasma membrane	25.72	7.61
VIT_12s0059g00850.t01	Wine grape	cytosol	1.29	4.44
VIT_10s0071g00170.t01	Wine grape	cytosol, extracellular	1.61	3.91
VIT_10s0071g00180.t01	Wine grape	extracellular	0.96	2.68

Protein Annotations

EnsemblPlants:CDX89977	EnsemblPlantsGene:GSBRNA2T00150471001	GO:A0A078DM45	InterPro:IPR000403	InterPro:Kinase-like_dom_sf	InterPro:PI3/4_kinase_cat_dom
PANTHER:PTHR10666	PANTHER:PTHR10666:SF90	PFAM:PF00454	ProteinID:CDX89977	ProteinID:CDX89977.1	SUPFAM:SSF56112
UniParc:UPI0002544DBB	MapMan:35.1	:	:	:	:

Description

BnaA10g01050D

Coordinates

chrLK031861:+:1056031..1057106

Molecular Weight (calculated)

35522.0 Da

IEP (calculated)

6.953

GRAVY (calculated)

-0.603

Length

311 amino acids

Sequence
(BLAST)

001: MVEEVQQPST IGVIVKGIDN IKYAEKIKGT SNGTYLMKGL REEMIAVFKP IQEETFYRAG KKKGYKADRE VAAFILDHPA QEGGEGFGRV PPTSFARARY
101: TNGETTDWDS GSLQQYVPNQ EWNQRPEVFA IDDVQRLSLV DVRFGNNDRH NGNILNSNTN GGRLIPIDHG ECFPTEWNNY RFIWTTWAQA AFPYPYYMVD
201: YVKSLDVKND LNTLKENGIE LGERSEFIYK VQNRVLQAGV LGGYTPKDIG KFMTKAYRSK KEKAPRTIID VMNCMSGIPE AWSVEERQVL ELVHEKTTSA
301: LDYNRRYVSS L

Best Arabidopsis Sequence Match ( AT2G46500.1 )
(BLAST)

001: MSSAGVALSP VRSEPLIMPL VRANSCLDSY PDDTIMIYLT LPGSVIPMRV LESDSIESVK LRIQSYRGFV VRNQKLVFGG RELARSNSNM RDYGVSEGNI
101: LHLVLKLSDL QVLDVKTTCG KHCRFHVERG RNIGYVKKQI SKKRGDFVDP DEQEILYEGE KLEDQSLIND ICRNDDSVLH LLVRRSAKVR VKPVEKNFEL
201: SIVAPQAKDK KGREAKSIVP PKKLSLEPVV VNSKAKVPLV VKDMIQSASD GLKSGNSPVR SSEGTGGAYF MQGPSGNKFV GVFKPIDEEP MAENNPQGLP
301: LSPNGEGLKK GTKVGEGALR EVAAYILDHP KSGNKSMFGE EIGFAGVPPT AMIECLHPGF NHPKGIKTKI GSLQMFTEND GSCEDMGPLS FPVEEVHKIS
401: VLDIRLANAD RHGGNILMTK DESGKLVLVP IDHGYCLPES FEDCTFEWLY WPQARKPYSA ETQEYIRSLD AEEDIDLLKF HGWKMPAETA QTLRISTMLL
501: KKGVERGLTA FEIGTIMCRE TLSKKSLVEE MVEEAQEAVL PGTSEAAFLE ALSDVMDYHL DHSQEH

Arabidopsis Description

PI4KG4Phosphatidylinositol 4-kinase gamma 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.