CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83526	Canola	cytosol	95.78	95.94
Bra025140.1-P	Field mustard	cytosol	89.94	94.7
AT2G03890.1	Thale cress	cytosol	92.37	87.54
CDY56175	Canola	cytosol	72.73	73.32
Solyc05g010810.1.1	Tomato	extracellular	74.03	71.25
PGSC0003DMT400050546	Potato	cytosol	71.75	70.38
VIT_01s0010g00600.t01	Wine grape	cytosol	71.1	69.75
PGSC0003DMT400004869	Potato	cytosol	68.83	67.62
Solyc04g005270.1.1	Tomato	cytosol	69.97	67.34
CDY34563	Canola	cytosol	67.21	66.99
CDY16149	Canola	cytosol, mitochondrion, plastid	66.07	66.94
CDY36079	Canola	cytosol	66.88	66.67
CDX85013	Canola	mitochondrion	66.56	66.02
Os04t0668700-01	Rice	cytosol, peroxisome, plastid	60.23	61.32
TraesCS2B01G570500.1	Wheat	peroxisome	59.9	59.71
TraesCS2D01G541800.1	Wheat	peroxisome	60.23	58.98
TraesCS2A01G540100.1	Wheat	peroxisome	60.39	58.86
EES13055	Sorghum	plastid	59.58	58.72
Zm00001d026559_P001	Maize	plastid	59.09	58.62
HORVU2Hr1G118320.7	Barley	mitochondrion, peroxisome, plastid	59.42	56.92
CDY14747	Canola	cytosol, peroxisome, plastid	34.42	43.18
CDY06957	Canola	cytosol, peroxisome, plastid	34.25	42.97
CDY22484	Canola	cytosol, extracellular, vacuole	35.06	40.83
CDY35435	Canola	cytosol, extracellular, vacuole	35.06	40.83
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	36.36	39.86
CDX83360	Canola	cytosol	17.53	34.39
CDY27320	Canola	cytosol	25.0	31.49
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.21	30.69
CDX87135	Canola	cytosol	23.21	30.69
CDY46532	Canola	cytosol	22.24	29.65
CDY66313	Canola	cytosol	25.81	28.86
CDY64881	Canola	cytosol	22.89	28.66
CDY47844	Canola	plastid	23.86	28.16
CDX88085	Canola	cytosol	25.81	27.7
CDY08380	Canola	cytosol	23.38	27.64
CDX80424	Canola	cytosol	25.49	27.35
CDX90007	Canola	cytosol	9.58	26.22
CDX95703	Canola	cytosol	21.1	26.21
CDX89977	Canola	cytosol	12.18	24.12
CDY27202	Canola	plasma membrane	37.34	21.88

Protein Annotations

MapMan:27.5.2.3	Gene3D:3.10.20.90	GO:A0A078IDC6	UniProt:A0A078IDC6	EnsemblPlants:CDY48067	ProteinID:CDY48067
ProteinID:CDY48067.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00088738001	InterPro:IPR000403
PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom	PANTHER:PTHR15245	PANTHER:PTHR15245:SF11	SUPFAM:SSF54236	UniParc:UPI0004EEF2E1
InterPro:Ubiquitin-like_domsf	SEG:seg	:	:	:	:

Description

BnaA06g33610DBnaA06g33610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDC6]

Coordinates

chrLK032752:+:29257..32250

Molecular Weight (calculated)

68996.9 Da

IEP (calculated)

6.010

GRAVY (calculated)

-0.479

Length

616 amino acids

Sequence
(BLAST)

001: MSRNLDSPVQ TQMAVAVFKT PLTGANNMEG KQHHRQHHQQ KLQRQSSGRR VFVQTETGCV LGMELDRSDN VHTVKRRLQI ALNFPTEESS LTYGDMVLTN
101: DLSAVRNDSP LLLKRNFMHR SSSTPCLSPT GRDLQQKDRS GPIEILGQSE CFSVVKQMVK DIVKAMKLGV DPLPVHSGLG GAYYFRNKKG DSVAIVKPTD
201: EEPFAPNNPK GFVGKALGQP GLKSSVRVGE TGFREVAAYL LDYNRFANVP PTALVKITHS VFNVNDGVKG NKAREKKLVS SKIASFQKFV AHDFDASDHG
301: TSSFPVASVH RIGILDVRIF NTDRHGGNLL VKKVGTFGEV ELIPIDHGLC LPETLEDPYF EWIHWPQASI PFSDEEIEYI QKLDPVKDCE MLRRELPMIR
401: EACLRVLVLC TVFLKEAASY GLCLAEIGEM MTREFRGGEE EPSELEVVCI EAKRSVTERD VFSPRSDVVI GEAEFQFDLD CDELESVLTD DYFTRNPFSN
501: GRSSLGKLEE SIKEEEDEDE EDEDITEKAN THLSDTGRKN NTKPLTRGKS ENTSSGHKSA NEQLQVSASF VKVADMKEDE WVLFLERFQE LLGPAFAKRK
601: TATLSKRQRL GTSCQF

Best Arabidopsis Sequence Match ( AT2G03890.1 )
(BLAST)

001: MSRNLDSPVQ TQMAVAVFKT PLTGASKMEG KQHHKHQHLQ RQSSGRRVFV QTETGCVLGM ELDRSDNVHT VKRRLQIALN FPTEESSLTY GDMVLTNDLS
101: AVRNDSPLLL KRNFMHRSSS TPCLSPTGRD LQQKDRSGPI EILGHSDCFS IVKHMVKDIV KAMKMGVEPL PVHSGLGGAY YFRNKRGESV AIVKPTDEEP
201: FAPNNPKGFV GKALGQPGLK SSVRVGETGF REVAAYLLDY GRFANVPPTA LVKITHSVFN VNDGVKGNKP REKKLVSKIA SFQKFVAHDF DASDHGTSSF
301: PVTSVHRIGI LDIRIFNTDR HGGNLLVKKL DGVGMFGQVE LIPIDHGLCL PETLEDPYFE WIHWPQASLP FSDEEVDYIQ SLDPVKDCDM LRRELPMIRE
401: ACLRVLVLCT IFLKEASAYG LCLAEIGEMM TREFRPGEEE PSELEVVCIE AKRSVTERDV FSPRSDVVGE AEFQFDLDCD DLESVYSSKI QLTDDYFTKN
501: PFSNGRSSLG KLEESIKEEE EDEEEEEDKT ENTVPMIIMK DSFFSSAAFH DKAPSLSKLS TSMKNTHLSD TTRKNPKPLT RGKSENTSSG HKSANEQLPV
601: SASFVKVADM KEDEWVLFLE RFQELLGPAF AKRKTATLSK RQRLGTSCQF

Arabidopsis Description

PI4KG7UBDK GAMMA 7 [Source:UniProtKB/TrEMBL;Acc:A0A178VP74]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.