CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06957	Canola	cytosol, peroxisome, plastid	96.13	96.13
CDY35435	Canola	cytosol, extracellular, vacuole	89.0	82.61
CDY22484	Canola	cytosol, extracellular, vacuole	88.59	82.23
AT2G40850.1	Thale cress	cytosol, extracellular, plasma membrane	85.13	74.51
CDX72124	Canola	mitochondrion, peroxisome, plasma membrane, vacuole	66.19	57.83
KRG95041	Soybean	cytosol, plastid	48.27	51.19
KRH66669	Soybean	mitochondrion	48.88	50.1
VIT_08s0040g00680.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	54.79	47.78
TraesCS3B01G215600.1	Wheat	plastid	38.29	45.41
TraesCS3D01G190000.1	Wheat	cytosol, plastid	38.09	45.17
TraesCS3A01G186000.1	Wheat	plastid	38.09	45.17
HORVU3Hr1G038320.1	Barley	plastid	37.68	44.47
PGSC0003DMT400018507	Potato	cytosol, plastid	50.71	43.99
Solyc10g078170.1.1	Tomato	cytosol, plastid	50.51	43.82
GSMUA_Achr5P27480_001	Banana	plastid	42.16	43.58
Zm00001d008265_P001	Maize	cytosol	38.09	42.21
EES00556	Sorghum	cytosol	38.7	41.21
Zm00001d040398_P001	Maize	plastid	38.29	38.06
Os01t0270700-00	Rice	mitochondrion	33.81	37.05
CDY48067	Canola	cytosol	43.18	34.42
CDX83526	Canola	cytosol	42.97	34.31
CDY16149	Canola	cytosol, mitochondrion, plastid	42.36	34.21
CDX85013	Canola	mitochondrion	42.97	33.98
CDY56175	Canola	cytosol	41.75	33.55
CDY34563	Canola	cytosol	42.16	33.5
CDY36079	Canola	cytosol	42.16	33.5
CDY27202	Canola	plasma membrane	66.8	31.21
CDX83360	Canola	cytosol	18.74	29.3
CDY19844	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.48	27.9
CDX87135	Canola	cytosol	25.87	27.25
CDY46532	Canola	cytosol	25.05	26.62
CDY27320	Canola	cytosol	25.66	25.77
CDY64881	Canola	cytosol	25.25	25.2
CDX89977	Canola	cytosol	15.89	25.08
CDY08380	Canola	cytosol	26.48	24.95
CDY47844	Canola	plastid	25.87	24.33
CDY66313	Canola	cytosol	26.48	23.59
CDX95703	Canola	cytosol	23.63	23.39
CDX80424	Canola	cytosol	26.88	23.0
CDX88085	Canola	cytosol	26.48	22.65
CDX90007	Canola	cytosol	10.18	22.22

Protein Annotations

EnsemblPlants:CDY14747	EnsemblPlantsGene:GSBRNA2T00084595001	GO:A0A078FPF7	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR000403
InterPro:PI3/4_kinase_cat_dom	PANTHER:PTHR15245	PANTHER:PTHR15245:SF23	PFAM:PF00454	ProteinID:CDY14747	ProteinID:CDY14747.1
UniParc:UPI0004EE1A17	UniProt:A0A078FPF7	MapMan:27.5.2.3	:	:	:

Description

BnaC04g47440DBnaC04g47440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPF7]

Coordinates

chrLK032047:+:54409..56289

Molecular Weight (calculated)

53636.5 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.110

Length

491 amino acids

Sequence
(BLAST)

001: MNCLATTITI TCKPTLISDM AVAIDPFSDK FPYFNRSSQR CRLQSLTNLD FSFLQSFKPK PEDDNIHRSV SSPCFSIASS ANMEEDKKAT AAPQIEILGG
101: QGVPTVRALV AEVTMAIVSG AQPMLLPSGL GGAYLLQTGK GHNIAVAKPV DEEPLALNNP KKSGSLRLGQ PGMKHSIPVG ETGVRELAAY LLDYQGFSSV
201: PPTALVSISH VPFHVSDAFS SVPYKVASLQ RFVCHDFDAG ELGPGSFTVA SVHRIGILDV RVLNLDRHSG NMLVKRCEQD KGVGTAELVP IDHGLCLPEC
301: LDDPYFEWLN WPQALVPFTE TELEYISNLD HFKDAELLRN ELHSLPESAI RVLIVCTVFL KQAAASGLCL AEIGEKMTRD FARSEDSFSL LETLCTKAKA
401: TVVDKGNEVK CEVEVHVSKP PLAPKGPHAK EKKRGNTMRS KSPSMSVQYV ESEGVSFGDM TTVQWDMFLE SFQRLLQEAL SKRLVPSLGK Q

Best Arabidopsis Sequence Match ( AT2G40850.1 )
(BLAST)

001: MNCLATTIII TCKPTLISDM AVAIDPFSDK FPYFNRSSQR CRLQSLTNLD FNFLAQSFNH TFEDDNIHRS VSSPCFSIAA SANMEEDLKA TTAPRIEILG
101: GQRVPTVRAL VAEVTMAMVS GAQPLLLPSG MGGAYLLQTG KGHNIAVAKP VDEEPLAFNN PKKSGNLMLG QPGMKHSIPV GETGIRELAA YLLDYQGFSG
201: VPPTALVSIS HVPFHVSDAF SFSSMPYKVA SLQRFVGHDF DAGELGPGSF TATSVHRIGI LDVRLLNLDR HAGNMLVKRC DKKEAYNRLG TAELVPIDHG
301: LCLPECLDDP YFEWLNWPQA LVPFSDTELD YISNLDPFKD AELLRTELHS LPESAIRVLV VCTVFLKQAA AAGLCLAEIG EKMTRDFSKG EESFSLLETL
401: CTKAKASVFG KTSEDSDYSH EGNEVNTELQ CGMFKFDGGD TPCEAEISEV FHVSKPPLVP RGPRANTIPN DVTASMSSSQ NQRITHQEKS AKEKKRGGKQ
501: ERCTVRSKSP PISPNHDESK GVSFVDMTTV EWDTFLQSFQ TLLQDALSKG STPRLGCSCE I

Arabidopsis Description

PI4KG1Phosphatidylinositol 4-kinase gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:O22199]
SUBAcon: [plasma membrane,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.